Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL590004.2-201ENST00000404787 371 ntBASIC3.28□□□□□ -1.88
TPM1P09493 RNU2-17P-201ENST00000410290 190 ntBASIC3.28□□□□□ -1.88
TPM1P09493 RPS7P15-201ENST00000415804 584 ntBASIC3.28□□□□□ -1.88
TPM1P09493 AC114973.1-201ENST00000429057 632 ntBASIC3.28□□□□□ -1.88
TPM1P09493 HMGN2P31-201ENST00000432430 273 ntBASIC3.28□□□□□ -1.88
TPM1P09493 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.28□□□□□ -1.88
TPM1P09493 RPL21P41-201ENST00000459863 264 ntBASIC3.28□□□□□ -1.88
TPM1P09493 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.28□□□□□ -1.88
TPM1P09493 MTCO3P44-201ENST00000510977 541 ntBASIC3.28□□□□□ -1.88
TPM1P09493 RNU6-488P-201ENST00000515918 99 ntBASIC3.28□□□□□ -1.88
TPM1P09493 RN7SKP272-201ENST00000516988 232 ntBASIC3.28□□□□□ -1.88
TPM1P09493 RNU1-45P-201ENST00000517191 141 ntBASIC3.28□□□□□ -1.88
TPM1P09493 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.28□□□□□ -1.88
TPM1P09493 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.28□□□□□ -1.88
TPM1P09493 HIGD1AP5-201ENST00000529959 259 ntBASIC3.28□□□□□ -1.88
TPM1P09493 AC007458.1-201ENST00000542812 373 ntBASIC3.28□□□□□ -1.88
TPM1P09493 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM1P09493 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.28□□□□□ -1.88
TPM1P09493 AC125494.3-201ENST00000602759 455 ntBASIC3.28□□□□□ -1.88
TPM1P09493 AC004775.1-201ENST00000607389 753 ntBASIC3.28□□□□□ -1.88
TPM1P09493 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM1P09493 AC009032.1-201ENST00000617574 431 ntBASIC3.28□□□□□ -1.88
TPM1P09493 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.28□□□□□ -1.88
TPM1P09493 AL356118.1-201ENST00000635272 1078 ntBASIC3.28□□□□□ -1.88
TPM1P09493 AC017104.5-201ENST00000637647 639 ntBASIC3.28□□□□□ -1.88
TPM1P09493 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
TPM1P09493 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.28□□□□□ -1.89
TPM1P09493 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.27□□□□□ -1.89
TPM1P09493 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TPM1P09493 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.27□□□□□ -1.89
TPM1P09493 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
TPM1P09493 RAB28P1-201ENST00000411517 641 ntBASIC3.27□□□□□ -1.89
TPM1P09493 AC092745.2-202ENST00000411880 369 ntBASIC3.27□□□□□ -1.89
TPM1P09493 AC245052.5-201ENST00000416320 649 ntBASIC3.27□□□□□ -1.89
TPM1P09493 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.27□□□□□ -1.89
TPM1P09493 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.27□□□□□ -1.89
TPM1P09493 Z95327.1-201ENST00000446082 482 ntBASIC3.27□□□□□ -1.89
TPM1P09493 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.27□□□□□ -1.89
TPM1P09493 CYCSP35-201ENST00000451978 304 ntBASIC3.27□□□□□ -1.89
TPM1P09493 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.27□□□□□ -1.89
TPM1P09493 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TPM1P09493 AC111000.2-201ENST00000507775 550 ntBASIC3.27□□□□□ -1.89
TPM1P09493 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 RNU6-202P-201ENST00000515998 96 ntBASIC3.27□□□□□ -1.89
TPM1P09493 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.27□□□□□ -1.89
TPM1P09493 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TPM1P09493 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TPM1P09493 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM1P09493 AL020991.1-201ENST00000612314 373 ntBASIC3.27□□□□□ -1.89
TPM1P09493 AC100793.4-201ENST00000613683 429 ntBASIC3.27□□□□□ -1.89
TPM1P09493 AC095031.1-201ENST00000623685 672 ntBASIC3.27□□□□□ -1.89
TPM1P09493 AL109659.3-201ENST00000624985 950 ntBASIC3.27□□□□□ -1.89
TPM1P09493 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TPM1P09493 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TPM1P09493 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TPM1P09493 FAM35BP-202ENST00000497389 3337 ntBASIC3.26□□□□□ -1.89
TPM1P09493 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.26□□□□□ -1.89
TPM1P09493 ZNF90P1-201ENST00000480493 1951 ntBASIC3.26□□□□□ -1.89
TPM1P09493 RPL9P7-201ENST00000330965 580 ntBASIC3.26□□□□□ -1.89
TPM1P09493 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TPM1P09493 MTND4P13-201ENST00000402078 1023 ntBASIC3.26□□□□□ -1.89
TPM1P09493 RNU6-272P-201ENST00000411028 104 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.26□□□□□ -1.89
TPM1P09493 RPL21P32-201ENST00000419877 477 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.26□□□□□ -1.89
TPM1P09493 AC109583.1-201ENST00000432156 268 ntBASIC3.26□□□□□ -1.89
TPM1P09493 RPS29P6-201ENST00000438196 145 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AC006028.1-201ENST00000438379 402 ntBASIC3.26□□□□□ -1.89
TPM1P09493 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TPM1P09493 AC008571.1-201ENST00000467232 300 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AC015724.1-201ENST00000478577 156 ntBASIC3.26□□□□□ -1.89
TPM1P09493 OR5H5P-201ENST00000503164 928 ntBASIC3.26□□□□□ -1.89
TPM1P09493 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.26□□□□□ -1.89
TPM1P09493 FAM60DP-201ENST00000524174 632 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.26□□□□□ -1.89
TPM1P09493 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.26□□□□□ -1.89
TPM1P09493 BNIP3P5-201ENST00000562290 498 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AC034105.3-201ENST00000565294 442 ntBASIC3.26□□□□□ -1.89
TPM1P09493 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TPM1P09493 AC005242.1-201ENST00000585658 438 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AC009220.3-201ENST00000604318 586 ntBASIC3.26□□□□□ -1.89
TPM1P09493 DPRXP5-201ENST00000604662 539 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AC128687.1-201ENST00000605304 619 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AC013468.1-201ENST00000608680 598 ntBASIC3.26□□□□□ -1.89
TPM1P09493 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.26□□□□□ -1.89
TPM1P09493 AC024595.1-201ENST00000623088 387 ntBASIC3.26□□□□□ -1.89
TPM1P09493 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.26□□□□□ -1.89
TPM1P09493 Z82195.2-201ENST00000612348 18351 ntBASIC3.26□□□□□ -1.89
TPM1P09493 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
TPM1P09493 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TPM1P09493 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TPM1P09493 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.25□□□□□ -1.89
TPM1P09493 OR6K3-202ENST00000368146 996 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms