Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.51□□□□□ -1.69
RHOP08100 SNORA84-201ENST00000459229 133 ntBASIC4.51□□□□□ -1.69
RHOP08100 AC022447.3-201ENST00000506865 495 ntBASIC4.51□□□□□ -1.69
RHOP08100 AL592156.1-201ENST00000508758 304 ntBASIC4.51□□□□□ -1.69
RHOP08100 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHOP08100 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.51□□□□□ -1.69
RHOP08100 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.51□□□□□ -1.69
RHOP08100 AC013828.2-201ENST00000532487 235 ntBASIC4.51□□□□□ -1.69
RHOP08100 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.51□□□□□ -1.69
RHOP08100 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.51□□□□□ -1.69
RHOP08100 AC124947.2-202ENST00000552735 133 ntBASIC4.51□□□□□ -1.69
RHOP08100 RPS3AP4-201ENST00000555161 764 ntBASIC4.51□□□□□ -1.69
RHOP08100 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.51□□□□□ -1.69
RHOP08100 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.51□□□□□ -1.69
RHOP08100 MIR4716-201ENST00000579628 84 ntBASIC4.51□□□□□ -1.69
RHOP08100 MIR548S-201ENST00000581352 82 ntBASIC4.51□□□□□ -1.69
RHOP08100 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.51□□□□□ -1.69
RHOP08100 AC097468.3-201ENST00000607956 456 ntBASIC4.51□□□□□ -1.69
RHOP08100 AC103710.1-201ENST00000610003 901 ntBASIC4.51□□□□□ -1.69
RHOP08100 AC090970.3-201ENST00000612566 866 ntBASIC4.51□□□□□ -1.69
RHOP08100 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.51□□□□□ -1.69
RHOP08100 AC034229.5-201ENST00000624258 185 ntBASIC4.51□□□□□ -1.69
RHOP08100 AC008785.1-201ENST00000624475 456 ntBASIC4.51□□□□□ -1.69
RHOP08100 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.51□□□□□ -1.69
RHOP08100 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHOP08100 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHOP08100 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHOP08100 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RHOP08100 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.51□□□□□ -1.69
RHOP08100 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RHOP08100 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.51□□□□□ -1.69
RHOP08100 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHOP08100 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHOP08100 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHOP08100 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 MAPK10-286ENST00000641208 8747 ntBASIC4.5□□□□□ -1.69
RHOP08100 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.5□□□□□ -1.69
RHOP08100 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RHOP08100 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RHOP08100 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RHOP08100 RNU1-85P-201ENST00000364127 164 ntBASIC4.5□□□□□ -1.69
RHOP08100 RNU5E-4P-201ENST00000364931 120 ntBASIC4.5□□□□□ -1.69
RHOP08100 RNA5SP151-201ENST00000365632 117 ntBASIC4.5□□□□□ -1.69
RHOP08100 AL359837.1-201ENST00000381357 287 ntBASIC4.5□□□□□ -1.69
RHOP08100 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 AC009237.10-201ENST00000414112 510 ntBASIC4.5□□□□□ -1.69
RHOP08100 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.5□□□□□ -1.69
RHOP08100 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.5□□□□□ -1.69
RHOP08100 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 MTCO3P2-201ENST00000457365 171 ntBASIC4.5□□□□□ -1.69
RHOP08100 RNU7-136P-201ENST00000458819 69 ntBASIC4.5□□□□□ -1.69
RHOP08100 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 AC010683.1-201ENST00000473673 378 ntBASIC4.5□□□□□ -1.69
RHOP08100 AC108941.1-201ENST00000502853 530 ntBASIC4.5□□□□□ -1.69
RHOP08100 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.5□□□□□ -1.69
RHOP08100 SAP18P1-201ENST00000512058 390 ntBASIC4.5□□□□□ -1.69
RHOP08100 RNU6-430P-201ENST00000517078 107 ntBASIC4.5□□□□□ -1.69
RHOP08100 MTCO2P4-201ENST00000517968 247 ntBASIC4.5□□□□□ -1.69
RHOP08100 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 AC118273.2-201ENST00000532092 465 ntBASIC4.5□□□□□ -1.69
RHOP08100 CYCSP28-201ENST00000534284 321 ntBASIC4.5□□□□□ -1.69
RHOP08100 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 AC068446.3-201ENST00000555285 382 ntBASIC4.5□□□□□ -1.69
RHOP08100 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.5□□□□□ -1.69
RHOP08100 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.5□□□□□ -1.69
RHOP08100 MIR5186-201ENST00000577504 120 ntBASIC4.5□□□□□ -1.69
RHOP08100 MIR544B-201ENST00000582372 78 ntBASIC4.5□□□□□ -1.69
RHOP08100 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.5□□□□□ -1.69
RHOP08100 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 BCRP9-201ENST00000605312 388 ntBASIC4.5□□□□□ -1.69
RHOP08100 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.5□□□□□ -1.69
RHOP08100 AC138649.3-201ENST00000622154 254 ntBASIC4.5□□□□□ -1.69
RHOP08100 AC099654.13-201ENST00000639774 207 ntBASIC4.5□□□□□ -1.69
RHOP08100 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.5□□□□□ -1.69
RHOP08100 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 AC117529.2-201ENST00000512159 2068 ntBASIC4.5□□□□□ -1.69
RHOP08100 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
RHOP08100 AL133243.3-201ENST00000617415 3004 ntBASIC4.5□□□□□ -1.69
RHOP08100 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHOP08100 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.49□□□□□ -1.69
RHOP08100 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RHOP08100 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RHOP08100 XPOTP1-201ENST00000443317 2398 ntBASIC4.49□□□□□ -1.69
RHOP08100 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHOP08100 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHOP08100 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RHOP08100 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHOP08100 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RHOP08100 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RHOP08100 RNU6-777P-201ENST00000364265 104 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms