Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.1□□□□□ -1.75
RB1P06400 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RB1P06400 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.1□□□□□ -1.75
RB1P06400 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RB1P06400 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RB1P06400 MTCO1P23-201ENST00000415223 1526 ntBASIC4.1□□□□□ -1.75
RB1P06400 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RB1P06400 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RB1P06400 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.09□□□□□ -1.75
RB1P06400 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RB1P06400 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.09□□□□□ -1.75
RB1P06400 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RB1P06400 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RB1P06400 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.09□□□□□ -1.75
RB1P06400 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RB1P06400 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
RB1P06400 Y_RNA.111-201ENST00000363248 100 ntBASIC4.09□□□□□ -1.75
RB1P06400 RNA5SP51-201ENST00000364750 119 ntBASIC4.09□□□□□ -1.75
RB1P06400 RNA5SP267-201ENST00000364893 126 ntBASIC4.09□□□□□ -1.75
RB1P06400 Y_RNA.493-201ENST00000384422 102 ntBASIC4.09□□□□□ -1.75
RB1P06400 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.09□□□□□ -1.75
RB1P06400 ATP5A1P2-201ENST00000412323 255 ntBASIC4.09□□□□□ -1.75
RB1P06400 AL158156.1-201ENST00000422509 473 ntBASIC4.09□□□□□ -1.75
RB1P06400 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.09□□□□□ -1.75
RB1P06400 HLA-N-201ENST00000437516 135 ntBASIC4.09□□□□□ -1.75
RB1P06400 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.09□□□□□ -1.75
RB1P06400 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.09□□□□□ -1.75
RB1P06400 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.09□□□□□ -1.75
RB1P06400 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 RPS15AP17-201ENST00000470598 390 ntBASIC4.09□□□□□ -1.75
RB1P06400 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 GMPSP1-201ENST00000514075 579 ntBASIC4.09□□□□□ -1.75
RB1P06400 RN7SKP116-201ENST00000516902 319 ntBASIC4.09□□□□□ -1.75
RB1P06400 Y_RNA.717-201ENST00000517106 92 ntBASIC4.09□□□□□ -1.75
RB1P06400 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.09□□□□□ -1.75
RB1P06400 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RB1P06400 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RB1P06400 AL133457.1-201ENST00000564251 987 ntBASIC4.09□□□□□ -1.75
RB1P06400 AC107954.1-201ENST00000565906 727 ntBASIC4.09□□□□□ -1.75
RB1P06400 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
RB1P06400 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.09□□□□□ -1.75
RB1P06400 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
RB1P06400 AC011471.1-201ENST00000585766 187 ntBASIC4.09□□□□□ -1.75
RB1P06400 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.09□□□□□ -1.75
RB1P06400 BNIP3P24-201ENST00000593398 557 ntBASIC4.09□□□□□ -1.75
RB1P06400 AC020914.6-201ENST00000594327 272 ntBASIC4.09□□□□□ -1.75
RB1P06400 BNIP3P11-201ENST00000603878 563 ntBASIC4.09□□□□□ -1.75
RB1P06400 AC073968.1-201ENST00000618594 637 ntBASIC4.09□□□□□ -1.75
RB1P06400 MIR4727-201ENST00000622232 55 ntBASIC4.09□□□□□ -1.75
RB1P06400 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.09□□□□□ -1.75
RB1P06400 CYP3A51P-201ENST00000633513 256 ntBASIC4.09□□□□□ -1.75
RB1P06400 U6.101-201ENST00000637707 76 ntBASIC4.09□□□□□ -1.75
RB1P06400 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.09□□□□□ -1.75
RB1P06400 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RB1P06400 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
RB1P06400 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RB1P06400 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.09□□□□□ -1.76
RB1P06400 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.76
RB1P06400 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RB1P06400 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RB1P06400 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RB1P06400 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 MTND4LP20-201ENST00000402379 270 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.08□□□□□ -1.76
RB1P06400 FNDC3CP-201ENST00000420795 1155 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC093698.1-201ENST00000423843 571 ntBASIC4.08□□□□□ -1.76
RB1P06400 ELOCP18-201ENST00000434209 337 ntBASIC4.08□□□□□ -1.76
RB1P06400 Z74696.2-201ENST00000436514 498 ntBASIC4.08□□□□□ -1.76
RB1P06400 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.08□□□□□ -1.76
RB1P06400 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 HMGB1P37-201ENST00000439613 609 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC092641.1-201ENST00000440229 772 ntBASIC4.08□□□□□ -1.76
RB1P06400 MTND3P1-201ENST00000441336 220 ntBASIC4.08□□□□□ -1.76
RB1P06400 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.08□□□□□ -1.76
RB1P06400 AC005539.1-201ENST00000443768 1479 ntBASIC4.08□□□□□ -1.76
RB1P06400 RANP8-201ENST00000444720 713 ntBASIC4.08□□□□□ -1.76
RB1P06400 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RB1P06400 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.08□□□□□ -1.76
RB1P06400 RPL7P18-201ENST00000478965 734 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC106872.2-201ENST00000494303 480 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC104090.1-201ENST00000506341 1171 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC021146.8-201ENST00000507455 733 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC017037.1-201ENST00000508460 471 ntBASIC4.08□□□□□ -1.76
RB1P06400 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 RNU6-583P-201ENST00000516012 92 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.08□□□□□ -1.76
RB1P06400 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms