Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VAPBO95292 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VAPBO95292 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VAPBO95292 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPBO95292 SNORA63.1-201ENST00000362493 131 ntBASIC3.01□□□□□ -1.93
VAPBO95292 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
VAPBO95292 AL353692.2-201ENST00000407054 335 ntBASIC3.01□□□□□ -1.93
VAPBO95292 SNORA11C-201ENST00000408532 129 ntBASIC3.01□□□□□ -1.93
VAPBO95292 RN7SKP27-201ENST00000410684 333 ntBASIC3.01□□□□□ -1.93
VAPBO95292 AC109780.2-201ENST00000413467 845 ntBASIC3.01□□□□□ -1.93
VAPBO95292 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.01□□□□□ -1.93
VAPBO95292 RAD23BP2-201ENST00000416003 1207 ntBASIC3.01□□□□□ -1.93
VAPBO95292 RPS3AP9-201ENST00000417027 792 ntBASIC3.01□□□□□ -1.93
VAPBO95292 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VAPBO95292 OFD1P18Y-201ENST00000420889 959 ntBASIC3.01□□□□□ -1.93
VAPBO95292 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.01□□□□□ -1.93
VAPBO95292 RFESDP1-201ENST00000422350 461 ntBASIC3.01□□□□□ -1.93
VAPBO95292 RPL7P46-201ENST00000425129 740 ntBASIC3.01□□□□□ -1.93
VAPBO95292 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPBO95292 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPBO95292 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPBO95292 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.01□□□□□ -1.93
VAPBO95292 RPL7P59-201ENST00000447700 943 ntBASIC3.01□□□□□ -1.93
VAPBO95292 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPBO95292 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPBO95292 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPBO95292 snoU13.4-201ENST00000458916 104 ntBASIC3.01□□□□□ -1.93
VAPBO95292 RN7SL807P-201ENST00000470923 297 ntBASIC3.01□□□□□ -1.93
VAPBO95292 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPBO95292 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPBO95292 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPBO95292 AC104057.1-201ENST00000515547 497 ntBASIC3.01□□□□□ -1.93
VAPBO95292 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPBO95292 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPBO95292 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.01□□□□□ -1.93
VAPBO95292 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VAPBO95292 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPBO95292 MIR5004-201ENST00000579078 107 ntBASIC3.01□□□□□ -1.93
VAPBO95292 AC013468.1-201ENST00000608680 598 ntBASIC3.01□□□□□ -1.93
VAPBO95292 VIS1.1-201ENST00000610517 203 ntBASIC3.01□□□□□ -1.93
VAPBO95292 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VAPBO95292 AC244100.1-202ENST00000621554 382 ntBASIC3.01□□□□□ -1.93
VAPBO95292 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.01□□□□□ -1.93
VAPBO95292 AP003400.6-201ENST00000624698 740 ntBASIC3.01□□□□□ -1.93
VAPBO95292 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VAPBO95292 AC110774.1-201ENST00000623567 2018 ntBASIC3.01□□□□□ -1.93
VAPBO95292 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.01□□□□□ -1.93
VAPBO95292 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.01□□□□□ -1.93
VAPBO95292 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPBO95292 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
VAPBO95292 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VAPBO95292 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAPBO95292 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAPBO95292 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
VAPBO95292 RNU1-85P-201ENST00000364127 164 ntBASIC3□□□□□ -1.93
VAPBO95292 RNU6-444P-201ENST00000383988 108 ntBASIC3□□□□□ -1.93
VAPBO95292 SNORA54-201ENST00000384281 123 ntBASIC3□□□□□ -1.93
VAPBO95292 MIR34B-201ENST00000385076 84 ntBASIC3□□□□□ -1.93
VAPBO95292 RNA5SP56-201ENST00000410277 118 ntBASIC3□□□□□ -1.93
VAPBO95292 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3□□□□□ -1.93
VAPBO95292 AC096632.1-201ENST00000427395 310 ntBASIC3□□□□□ -1.93
VAPBO95292 AC073508.1-201ENST00000428866 656 ntBASIC3□□□□□ -1.93
VAPBO95292 AC005189.1-201ENST00000431286 310 ntBASIC3□□□□□ -1.93
VAPBO95292 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3□□□□□ -1.93
VAPBO95292 GAPDHP27-201ENST00000447427 1020 ntBASIC3□□□□□ -1.93
VAPBO95292 AL358232.1-201ENST00000448030 501 ntBASIC3□□□□□ -1.93
VAPBO95292 AC089999.1-201ENST00000460336 374 ntBASIC3□□□□□ -1.93
VAPBO95292 RPL21P8-201ENST00000465083 535 ntBASIC3□□□□□ -1.93
VAPBO95292 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3□□□□□ -1.93
VAPBO95292 RPS23P3-201ENST00000470993 430 ntBASIC3□□□□□ -1.93
VAPBO95292 RPL7P5-201ENST00000471472 736 ntBASIC3□□□□□ -1.93
VAPBO95292 AC017015.1-201ENST00000477387 286 ntBASIC3□□□□□ -1.93
VAPBO95292 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3□□□□□ -1.93
VAPBO95292 AL358832.1-201ENST00000497800 389 ntBASIC3□□□□□ -1.93
VAPBO95292 PRELID3BP6-201ENST00000503839 571 ntBASIC3□□□□□ -1.93
VAPBO95292 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAPBO95292 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3□□□□□ -1.93
VAPBO95292 RN7SKP272-201ENST00000516988 232 ntBASIC3□□□□□ -1.93
VAPBO95292 RNU6-711P-201ENST00000517255 106 ntBASIC3□□□□□ -1.93
VAPBO95292 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3□□□□□ -1.93
VAPBO95292 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3□□□□□ -1.93
VAPBO95292 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3□□□□□ -1.93
VAPBO95292 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3□□□□□ -1.93
VAPBO95292 AL513477.2-201ENST00000607858 568 ntBASIC3□□□□□ -1.93
VAPBO95292 AC069200.1-201ENST00000609511 323 ntBASIC3□□□□□ -1.93
VAPBO95292 AL162574.2-201ENST00000614618 657 ntBASIC3□□□□□ -1.93
VAPBO95292 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3□□□□□ -1.93
VAPBO95292 AC068831.7-201ENST00000616954 363 ntBASIC3□□□□□ -1.93
VAPBO95292 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3□□□□□ -1.93
VAPBO95292 AC084035.1-201ENST00000634543 607 ntBASIC3□□□□□ -1.93
VAPBO95292 AC139713.2-210ENST00000641741 992 ntBASIC3□□□□□ -1.93
VAPBO95292 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAPBO95292 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAPBO95292 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
VAPBO95292 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.99□□□□□ -1.93
VAPBO95292 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
VAPBO95292 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.99□□□□□ -1.93
VAPBO95292 RNVU1-3-201ENST00000364313 161 ntBASIC2.99□□□□□ -1.93
VAPBO95292 SNORD51.1-201ENST00000365405 77 ntBASIC2.99□□□□□ -1.93
VAPBO95292 RNU6-1226P-201ENST00000384317 107 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms