Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RPS15AP6-201ENST00000420703 385 ntBASIC3.95□□□□□ -1.78
PCF11O94913 RPL7P52-201ENST00000449200 742 ntBASIC3.95□□□□□ -1.78
PCF11O94913 MTCYBP14-201ENST00000457471 715 ntBASIC3.95□□□□□ -1.78
PCF11O94913 OR4A45P-201ENST00000529954 901 ntBASIC3.95□□□□□ -1.78
PCF11O94913 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.95□□□□□ -1.78
PCF11O94913 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.95□□□□□ -1.78
PCF11O94913 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.95□□□□□ -1.78
PCF11O94913 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.95□□□□□ -1.78
PCF11O94913 VN1R9P-201ENST00000614184 867 ntBASIC3.95□□□□□ -1.78
PCF11O94913 RNU1-100P-201ENST00000365255 165 ntBASIC3.94□□□□□ -1.78
PCF11O94913 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCF11O94913 AL359511.1-201ENST00000402970 211 ntBASIC3.94□□□□□ -1.78
PCF11O94913 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.94□□□□□ -1.78
PCF11O94913 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.94□□□□□ -1.78
PCF11O94913 CLIC4P1-201ENST00000453177 535 ntBASIC3.94□□□□□ -1.78
PCF11O94913 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.94□□□□□ -1.78
PCF11O94913 AC105036.1-201ENST00000566222 271 ntBASIC3.94□□□□□ -1.78
PCF11O94913 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.94□□□□□ -1.78
PCF11O94913 AL021368.2-201ENST00000606125 5352 ntBASIC3.94□□□□□ -1.78
PCF11O94913 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCF11O94913 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCF11O94913 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.94□□□□□ -1.78
PCF11O94913 RPS12P2-201ENST00000439728 269 ntBASIC3.93□□□□□ -1.78
PCF11O94913 HIGD1AP2-201ENST00000446367 280 ntBASIC3.93□□□□□ -1.78
PCF11O94913 AC147055.1-201ENST00000509261 750 ntBASIC3.93□□□□□ -1.78
PCF11O94913 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.93□□□□□ -1.78
PCF11O94913 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.93□□□□□ -1.78
PCF11O94913 AL110115.1-201ENST00000614396 364 ntBASIC3.93□□□□□ -1.78
PCF11O94913 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.93□□□□□ -1.78
PCF11O94913 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCF11O94913 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PCF11O94913 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.93□□□□□ -1.78
PCF11O94913 PTP4A1P5-201ENST00000420305 455 ntBASIC3.93□□□□□ -1.78
PCF11O94913 EXTL2P1-201ENST00000446218 416 ntBASIC3.93□□□□□ -1.78
PCF11O94913 ST13P20-201ENST00000447996 1065 ntBASIC3.93□□□□□ -1.78
PCF11O94913 TRBV8-1-201ENST00000481590 279 ntBASIC3.93□□□□□ -1.78
PCF11O94913 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
PCF11O94913 RNA5SP76-201ENST00000516277 87 ntBASIC3.93□□□□□ -1.78
PCF11O94913 VTA1P2-201ENST00000520205 911 ntBASIC3.93□□□□□ -1.78
PCF11O94913 AC068446.3-201ENST00000555285 382 ntBASIC3.93□□□□□ -1.78
PCF11O94913 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.93□□□□□ -1.78
PCF11O94913 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.93□□□□□ -1.78
PCF11O94913 AC012119.1-201ENST00000603184 222 ntBASIC3.93□□□□□ -1.78
PCF11O94913 AC015849.6-201ENST00000605454 474 ntBASIC3.93□□□□□ -1.78
PCF11O94913 MIR8070-201ENST00000616510 88 ntBASIC3.93□□□□□ -1.78
PCF11O94913 MIR6715B-201ENST00000637172 77 ntBASIC3.93□□□□□ -1.78
PCF11O94913 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCF11O94913 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.93□□□□□ -1.78
PCF11O94913 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PCF11O94913 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.92□□□□□ -1.78
PCF11O94913 Z73965.1-201ENST00000623412 2297 ntBASIC3.92□□□□□ -1.78
PCF11O94913 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCF11O94913 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCF11O94913 RNU6-253P-201ENST00000384730 105 ntBASIC3.92□□□□□ -1.78
PCF11O94913 RNA5SP210-201ENST00000391034 120 ntBASIC3.92□□□□□ -1.78
PCF11O94913 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCF11O94913 MIR1183-201ENST00000408856 89 ntBASIC3.92□□□□□ -1.78
PCF11O94913 RPL21P18-201ENST00000469899 480 ntBASIC3.92□□□□□ -1.78
PCF11O94913 RN7SKP82-201ENST00000516786 223 ntBASIC3.92□□□□□ -1.78
PCF11O94913 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.92□□□□□ -1.78
PCF11O94913 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.92□□□□□ -1.78
PCF11O94913 AC090695.1-201ENST00000561269 1222 ntBASIC3.92□□□□□ -1.78
PCF11O94913 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.92□□□□□ -1.78
PCF11O94913 AC096586.2-201ENST00000610260 441 ntBASIC3.92□□□□□ -1.78
PCF11O94913 AC107871.2-201ENST00000612894 502 ntBASIC3.92□□□□□ -1.78
PCF11O94913 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PCF11O94913 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCF11O94913 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCF11O94913 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.91□□□□□ -1.78
PCF11O94913 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCF11O94913 AC096638.1-201ENST00000444678 216 ntBASIC3.91□□□□□ -1.78
PCF11O94913 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.91□□□□□ -1.78
PCF11O94913 AL035551.1-201ENST00000446931 348 ntBASIC3.91□□□□□ -1.78
PCF11O94913 HAUS1P1-201ENST00000505275 832 ntBASIC3.91□□□□□ -1.78
PCF11O94913 AC090819.1-201ENST00000523800 1111 ntBASIC3.91□□□□□ -1.78
PCF11O94913 RFPL1S-203ENST00000539579 330 ntBASIC3.91□□□□□ -1.78
PCF11O94913 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCF11O94913 AC023043.2-201ENST00000589678 1026 ntBASIC3.91□□□□□ -1.78
PCF11O94913 SNORA35B-201ENST00000607417 129 ntBASIC3.91□□□□□ -1.78
PCF11O94913 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.91□□□□□ -1.78
PCF11O94913 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCF11O94913 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.91□□□□□ -1.78
PCF11O94913 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCF11O94913 SNORD114-30-201ENST00000364448 72 ntBASIC3.9□□□□□ -1.78
PCF11O94913 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.9□□□□□ -1.78
PCF11O94913 RNU6-146P-201ENST00000384602 108 ntBASIC3.9□□□□□ -1.78
PCF11O94913 AL162578.1-201ENST00000406202 378 ntBASIC3.9□□□□□ -1.78
PCF11O94913 RNA5SP129-201ENST00000410276 118 ntBASIC3.9□□□□□ -1.78
PCF11O94913 AC069218.2-201ENST00000411665 344 ntBASIC3.9□□□□□ -1.78
PCF11O94913 VN1R31P-201ENST00000417498 730 ntBASIC3.9□□□□□ -1.78
PCF11O94913 AC099336.2-201ENST00000422457 254 ntBASIC3.9□□□□□ -1.78
PCF11O94913 RPS6P12-201ENST00000432491 726 ntBASIC3.9□□□□□ -1.78
PCF11O94913 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.9□□□□□ -1.78
PCF11O94913 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.9□□□□□ -1.78
PCF11O94913 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.9□□□□□ -1.78
PCF11O94913 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.9□□□□□ -1.78
PCF11O94913 CKS1BP7-201ENST00000522230 235 ntBASIC3.9□□□□□ -1.78
PCF11O94913 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.9□□□□□ -1.78
PCF11O94913 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.9□□□□□ -1.78
PCF11O94913 AC004241.3-201ENST00000611728 517 ntBASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms