Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AL513043.1-201ENST00000439124 535 ntBASIC3.81□□□□□ -1.8
BRD4O60885 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.81□□□□□ -1.8
BRD4O60885 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.81□□□□□ -1.8
BRD4O60885 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.81□□□□□ -1.8
BRD4O60885 HSPE1P6-201ENST00000479457 291 ntBASIC3.81□□□□□ -1.8
BRD4O60885 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.81□□□□□ -1.8
BRD4O60885 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.81□□□□□ -1.8
BRD4O60885 AP001207.1-201ENST00000524051 481 ntBASIC3.81□□□□□ -1.8
BRD4O60885 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.81□□□□□ -1.8
BRD4O60885 AP002770.2-201ENST00000543613 532 ntBASIC3.81□□□□□ -1.8
BRD4O60885 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.81□□□□□ -1.8
BRD4O60885 OR4H12P-201ENST00000556269 907 ntBASIC3.81□□□□□ -1.8
BRD4O60885 MIR4524B-201ENST00000581569 115 ntBASIC3.81□□□□□ -1.8
BRD4O60885 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.81□□□□□ -1.8
BRD4O60885 SNORA35B-201ENST00000607417 129 ntBASIC3.81□□□□□ -1.8
BRD4O60885 AL391834.1-201ENST00000609609 560 ntBASIC3.81□□□□□ -1.8
BRD4O60885 AL133370.2-201ENST00000619934 439 ntBASIC3.81□□□□□ -1.8
BRD4O60885 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
BRD4O60885 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRD4O60885 AC092593.1-201ENST00000515413 1815 ntBASIC3.81□□□□□ -1.8
BRD4O60885 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRD4O60885 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRD4O60885 MTND5P3-201ENST00000438536 1800 ntBASIC3.8□□□□□ -1.8
BRD4O60885 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.8□□□□□ -1.8
BRD4O60885 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
BRD4O60885 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.8□□□□□ -1.8
BRD4O60885 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BRD4O60885 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRD4O60885 TOMM20P4-201ENST00000427861 435 ntBASIC3.8□□□□□ -1.8
BRD4O60885 ARL5AP4-201ENST00000430731 512 ntBASIC3.8□□□□□ -1.8
BRD4O60885 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRD4O60885 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.8□□□□□ -1.8
BRD4O60885 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BRD4O60885 RNA5SP76-201ENST00000516277 87 ntBASIC3.8□□□□□ -1.8
BRD4O60885 RNU4-60P-201ENST00000517239 135 ntBASIC3.8□□□□□ -1.8
BRD4O60885 AC007954.1-201ENST00000554198 494 ntBASIC3.8□□□□□ -1.8
BRD4O60885 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.8□□□□□ -1.8
BRD4O60885 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.8□□□□□ -1.8
BRD4O60885 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
BRD4O60885 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRD4O60885 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
BRD4O60885 AP006437.1-201ENST00000641440 3685 ntBASIC3.79□□□□□ -1.8
BRD4O60885 RNU1-112P-201ENST00000364401 164 ntBASIC3.79□□□□□ -1.8
BRD4O60885 EIF5P1-201ENST00000400019 1231 ntBASIC3.79□□□□□ -1.8
BRD4O60885 AL356057.1-202ENST00000402263 756 ntBASIC3.79□□□□□ -1.8
BRD4O60885 AL592148.1-201ENST00000413568 445 ntBASIC3.79□□□□□ -1.8
BRD4O60885 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.79□□□□□ -1.8
BRD4O60885 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.79□□□□□ -1.8
BRD4O60885 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.79□□□□□ -1.8
BRD4O60885 HMGN2P20-201ENST00000437531 273 ntBASIC3.79□□□□□ -1.8
BRD4O60885 TPMTP4-201ENST00000450749 678 ntBASIC3.79□□□□□ -1.8
BRD4O60885 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.79□□□□□ -1.8
BRD4O60885 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.79□□□□□ -1.8
BRD4O60885 RNA5SP282-201ENST00000516355 108 ntBASIC3.79□□□□□ -1.8
BRD4O60885 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.79□□□□□ -1.8
BRD4O60885 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.79□□□□□ -1.8
BRD4O60885 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.79□□□□□ -1.8
BRD4O60885 AC234778.2-201ENST00000566241 354 ntBASIC3.79□□□□□ -1.8
BRD4O60885 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.79□□□□□ -1.8
BRD4O60885 AC069234.5-201ENST00000611056 416 ntBASIC3.79□□□□□ -1.8
BRD4O60885 AC107871.2-201ENST00000612894 502 ntBASIC3.79□□□□□ -1.8
BRD4O60885 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
BRD4O60885 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.79□□□□□ -1.8
BRD4O60885 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.79□□□□□ -1.8
BRD4O60885 TAB3P1-202ENST00000452645 1634 ntBASIC3.79□□□□□ -1.8
BRD4O60885 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BRD4O60885 RPL9P7-201ENST00000330965 580 ntBASIC3.78□□□□□ -1.8
BRD4O60885 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
BRD4O60885 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.78□□□□□ -1.8
BRD4O60885 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.78□□□□□ -1.8
BRD4O60885 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.78□□□□□ -1.8
BRD4O60885 MTCYBP29-201ENST00000436327 1006 ntBASIC3.78□□□□□ -1.8
BRD4O60885 NPM1P49-201ENST00000448027 714 ntBASIC3.78□□□□□ -1.8
BRD4O60885 RPL21P104-201ENST00000464143 478 ntBASIC3.78□□□□□ -1.8
BRD4O60885 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.78□□□□□ -1.8
BRD4O60885 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.78□□□□□ -1.8
BRD4O60885 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.78□□□□□ -1.8
BRD4O60885 AL355836.1-201ENST00000555951 870 ntBASIC3.78□□□□□ -1.8
BRD4O60885 MIR3605-201ENST00000583214 100 ntBASIC3.78□□□□□ -1.8
BRD4O60885 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
BRD4O60885 AP004607.9-201ENST00000618202 316 ntBASIC3.78□□□□□ -1.8
BRD4O60885 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
BRD4O60885 AC110774.1-201ENST00000623567 2018 ntBASIC3.78□□□□□ -1.8
BRD4O60885 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
BRD4O60885 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
BRD4O60885 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.78□□□□□ -1.8
BRD4O60885 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BRD4O60885 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
BRD4O60885 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
BRD4O60885 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BRD4O60885 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BRD4O60885 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BRD4O60885 MAPK10-362ENST00000641864 4484 ntBASIC3.78□□□□□ -1.81
BRD4O60885 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRD4O60885 MIR607-201ENST00000385241 96 ntBASIC3.77□□□□□ -1.81
BRD4O60885 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
BRD4O60885 MIR887-201ENST00000401258 79 ntBASIC3.77□□□□□ -1.81
BRD4O60885 AC004987.3-201ENST00000413879 771 ntBASIC3.77□□□□□ -1.81
BRD4O60885 XKRYP4-201ENST00000414395 483 ntBASIC3.77□□□□□ -1.81
BRD4O60885 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms