Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMX1BO60663 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.65□□□□□ -1.83
LMX1BO60663 RNU5F-6P-201ENST00000362979 116 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.65□□□□□ -1.83
LMX1BO60663 RNU6-723P-201ENST00000383973 107 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 RNU6-297P-201ENST00000384636 107 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 MIR506-201ENST00000384998 124 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 MIR548F1-201ENST00000408667 84 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 RNA5SP39-201ENST00000411245 120 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.65□□□□□ -1.83
LMX1BO60663 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.65□□□□□ -1.83
LMX1BO60663 EIF1P3-201ENST00000423841 334 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AL451062.2-201ENST00000427515 271 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 RPL7P2-201ENST00000427639 268 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 OR2B8P-201ENST00000432841 938 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.65□□□□□ -1.83
LMX1BO60663 AL022238.1-201ENST00000442557 355 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.65□□□□□ -1.83
LMX1BO60663 VN1R10P-201ENST00000447106 875 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 NANOGNBP1-201ENST00000448444 480 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.65□□□□□ -1.83
LMX1BO60663 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.65□□□□□ -1.83
LMX1BO60663 AC022431.1-201ENST00000450941 438 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.65□□□□□ -1.83
LMX1BO60663 RN7SL132P-201ENST00000478131 296 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.65□□□□□ -1.83
LMX1BO60663 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.65□□□□□ -1.83
LMX1BO60663 AC006499.2-201ENST00000513470 337 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.65□□□□□ -1.83
LMX1BO60663 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.65□□□□□ -1.83
LMX1BO60663 EEF1B2P4-201ENST00000551398 348 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.65□□□□□ -1.83
LMX1BO60663 AL389895.1-201ENST00000554127 252 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.65□□□□□ -1.83
LMX1BO60663 TVP23BP1-201ENST00000557500 617 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.65□□□□□ -1.83
LMX1BO60663 AC084757.1-201ENST00000559987 490 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 MIR4286-201ENST00000580651 93 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AP001004.1-201ENST00000582468 324 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.65□□□□□ -1.83
LMX1BO60663 OR4G1P-201ENST00000588632 938 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AL513477.2-201ENST00000607858 568 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.65□□□□□ -1.83
LMX1BO60663 U6atac.1-201ENST00000616025 117 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 MIR8059-201ENST00000620427 81 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 AC140479.6-201ENST00000633535 357 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LMX1BO60663 GDI2P1-201ENST00000429312 1336 ntBASIC3.65□□□□□ -1.83
LMX1BO60663 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMX1BO60663 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
LMX1BO60663 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMX1BO60663 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.64□□□□□ -1.83
LMX1BO60663 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.64□□□□□ -1.83
LMX1BO60663 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.64□□□□□ -1.83
LMX1BO60663 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMX1BO60663 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMX1BO60663 CYP1D1P-201ENST00000416662 1433 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMX1BO60663 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMX1BO60663 Y_RNA.97-201ENST00000363094 102 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMX1BO60663 RNU6-657P-201ENST00000383904 107 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 TMSB4XP8-201ENST00000402089 135 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMX1BO60663 AL121834.1-202ENST00000404494 277 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.64□□□□□ -1.83
LMX1BO60663 RN7SKP235-201ENST00000410662 305 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 RNU6-248P-201ENST00000410720 107 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 TMSB4XP6-201ENST00000415187 135 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 TMSB4XP1-201ENST00000424567 135 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.64□□□□□ -1.83
LMX1BO60663 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.64□□□□□ -1.83
LMX1BO60663 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.64□□□□□ -1.83
LMX1BO60663 NANOGP6-201ENST00000429190 847 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.64□□□□□ -1.83
LMX1BO60663 MRPS10P2-201ENST00000431226 381 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.64□□□□□ -1.83
LMX1BO60663 DNAJC19P1-201ENST00000455312 319 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 BNIP3P41-201ENST00000503774 571 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 AC139783.2-201ENST00000504847 1145 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.64□□□□□ -1.83
LMX1BO60663 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.64□□□□□ -1.83
LMX1BO60663 RNU6-202P-201ENST00000515998 96 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 RNA5SP519-201ENST00000516480 119 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 MYL12AP1-201ENST00000518490 515 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.64□□□□□ -1.83
LMX1BO60663 AP002748.2-201ENST00000528671 348 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
LMX1BO60663 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.64□□□□□ -1.83
LMX1BO60663 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.64□□□□□ -1.83
LMX1BO60663 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.64□□□□□ -1.83
LMX1BO60663 AC136619.2-201ENST00000563361 631 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 TPRKBP2-201ENST00000565969 475 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.64□□□□□ -1.83
LMX1BO60663 AC005771.1-201ENST00000585581 349 ntBASIC3.64□□□□□ -1.83
LMX1BO60663 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.64□□□□□ -1.83
LMX1BO60663 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms