Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC098657.3-201ENST00000620434 263 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL031601.2-202ENST00000622650 282 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC091953.5-201ENST00000622919 233 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL359851.1-201ENST00000569460 4997 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 MTND4P1-201ENST00000457501 1466 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 RNA5SP51-201ENST00000364750 119 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 U8.8-201ENST00000365399 135 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR142-201ENST00000384835 87 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AP002784.2-201ENST00000397300 549 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL109941.1-201ENST00000401925 229 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU6-628P-201ENST00000410675 107 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 OR8G2P-201ENST00000412796 908 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL512504.1-201ENST00000415494 778 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL035423.1-201ENST00000420331 213 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL645638.1-201ENST00000440519 361 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC104389.3-201ENST00000445629 235 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 COX6CP12-201ENST00000446748 202 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC016696.1-201ENST00000446949 318 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC073387.1-201ENST00000453261 709 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 RPL23AP45-201ENST00000476406 468 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 KLRA1P-201ENST00000503499 986 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC026402.1-201ENST00000513642 170 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU6-1004P-201ENST00000516584 111 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 IGKV2-26-201ENST00000518305 343 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 HMGB1P46-201ENST00000520062 610 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 HSPE1P5-201ENST00000561489 272 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC025281.1-201ENST00000567026 265 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 RPL23AP84-201ENST00000571193 464 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR3176-201ENST00000582210 90 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 OR7E18P-201ENST00000592589 702 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC020914.6-201ENST00000594327 272 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 NRBF2P5-201ENST00000603087 788 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AL136363.1-201ENST00000605349 337 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC005046.1-201ENST00000608515 625 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR6867-201ENST00000610636 67 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC092650.2-201ENST00000619984 902 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC091953.3-201ENST00000623220 236 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AP003072.5-201ENST00000623872 773 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 CR381653.2-201ENST00000624041 768 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR1910-201ENST00000636955 80 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 CRYM-AS1-204ENST00000637983 556 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR4302-201ENST00000638058 60 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AC008669.1-201ENST00000565823 2178 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 SGO1P2-201ENST00000429458 1589 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 AP000526.1-201ENST00000603308 1388 ntBASIC1.46□□□□□ -2.18
CHKB-CPT1BH3BT56 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU4-35P-201ENST00000362588 141 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 Y_RNA.62-201ENST00000362840 99 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR621-201ENST00000384919 96 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 U3.37-201ENST00000408528 213 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR1282-201ENST00000408865 101 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 MTND1P23-201ENST00000416931 372 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 HMGN2P38-201ENST00000423806 265 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 OR4K11P-201ENST00000431829 904 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC073063.1-201ENST00000434352 607 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 RPS20P5-201ENST00000434808 360 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms