Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 AC092656.1-203ENST00000624134 423 ntBASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 AC067931.1-201ENST00000624190 671 ntBASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 AC097714.1-201ENST00000511272 1647 ntBASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.23□□□□□ -1.73
TBC1D3FA6NER0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 RNU5F-7P-201ENST00000363696 115 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 RNVU1-3-201ENST00000364313 161 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 RNU4-75P-201ENST00000364621 146 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 RNU6-878P-201ENST00000384578 110 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 MIR153-1-201ENST00000384914 90 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 PPIAP31-201ENST00000405422 495 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AL355379.1-201ENST00000405542 640 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AL138880.1-201ENST00000405824 642 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 MIR1305-201ENST00000408300 86 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 PGBD4P8-201ENST00000412993 562 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 MTND1P28-201ENST00000435623 950 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 RPL37P21-201ENST00000435890 276 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC005008.1-201ENST00000456151 612 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 SUMO2P2-201ENST00000456482 255 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 RNA5SP269-201ENST00000459032 137 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AP001992.1-205ENST00000462248 379 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC007537.2-201ENST00000472093 511 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AP000797.1-201ENST00000478870 387 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC022447.3-201ENST00000506865 495 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC021146.3-201ENST00000511911 260 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 MTND4LP31-201ENST00000514859 294 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC093853.1-201ENST00000515689 483 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC006064.5-201ENST00000541782 248 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 MIR4286-201ENST00000580651 93 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC083760.1-201ENST00000589621 670 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 PRELID3BP8-201ENST00000604148 295 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC010680.4-201ENST00000605334 543 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC087752.4-201ENST00000605911 462 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC122108.2-201ENST00000611946 526 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC027807.2-201ENST00000616099 408 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC098679.4-201ENST00000624241 654 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC008013.2-202ENST00000637965 364 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC006378.2-201ENST00000623178 2476 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 AC017104.4-201ENST00000636283 1592 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 RLIMP1-201ENST00000339626 1680 ntBASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TBC1D3FA6NER0 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.21□□□□□ -1.73
TBC1D3FA6NER0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TBC1D3FA6NER0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
TBC1D3FA6NER0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TBC1D3FA6NER0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TBC1D3FA6NER0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 RNA5SP513-201ENST00000364648 118 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 RNU4-91P-201ENST00000364778 135 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 RNU6-339P-201ENST00000384310 107 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 RNU6-769P-201ENST00000384407 104 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 U8.14-201ENST00000390843 143 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 SNORD66.1-201ENST00000391230 76 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 U3.29-201ENST00000391296 212 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 AL445189.1-201ENST00000405722 338 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 RPL17P12-201ENST00000413391 526 ntBASIC4.21□□□□□ -1.74
TBC1D3FA6NER0 RPS7P13-201ENST00000413955 498 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms