Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC100870.1-201ENST00000522035 505 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 MTND4LP24-201ENST00000572277 291 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC009163.5-201ENST00000575421 637 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AL020991.1-201ENST00000612314 373 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 MIR181A2-201ENST00000384863 110 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AL159169.1-201ENST00000421119 127 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AL049610.1-201ENST00000423374 372 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 MTCYBP12-201ENST00000440559 1134 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AC010095.1-201ENST00000443543 144 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 OR6K1P-201ENST00000456766 971 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AP002884.2-201ENST00000471647 395 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 ACTR6P1-201ENST00000514311 1104 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 RNU4-60P-201ENST00000517239 135 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 OR4U1P-201ENST00000554958 912 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AL355836.1-201ENST00000555951 870 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AC006254.3-201ENST00000603353 884 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AC092608.2-201ENST00000624427 218 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 AP000526.1-201ENST00000603308 1388 ntBASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN10AQ9Y5Y9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 RNU6-317P-201ENST00000384031 107 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 RNA5SP425-201ENST00000410336 112 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC013404.1-201ENST00000413068 249 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 TOMM20P4-201ENST00000427861 435 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 CFTRP1-201ENST00000456646 183 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 HMGB1P25-201ENST00000468402 607 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC078918.1-201ENST00000498515 228 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 DYNLL1P6-201ENST00000503440 264 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC008565.1-201ENST00000509046 885 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AP003102.1-201ENST00000525638 661 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AP001646.1-201ENST00000527936 915 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 MIR548Y-201ENST00000582739 110 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AP005212.4-201ENST00000614206 710 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AL589935.2-201ENST00000616471 1231 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC092628.2-201ENST00000622492 339 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC079228.1-201ENST00000624774 1049 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC091152.2-201ENST00000591628 2569 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 SNORA36C-201ENST00000384289 132 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 MIR27B-201ENST00000385129 97 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 ATF1P1-201ENST00000406040 927 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 MTCO1P39-201ENST00000426148 480 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AL139415.2-201ENST00000431968 163 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 BUD31P2-201ENST00000449374 300 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 RPL21P103-201ENST00000479921 488 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 SNORA9.3-201ENST00000516383 129 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AP003117.2-201ENST00000606010 545 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 AF127577.6-201ENST00000623352 2191 ntBASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SCN10AQ9Y5Y9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AL359715.4-201ENST00000606629 1436 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 OR56A5-201ENST00000340110 738 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 RNU6-328P-201ENST00000390887 106 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms