Protein–RNA interactions for Protein: Q9Y5W8

SNX13, Sorting nexin-13, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13Q9Y5W8 AC123904.2-201ENST00000548059 300 ntBASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AC069240.1-201ENST00000548774 375 ntBASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AC010928.3-201ENST00000587712 541 ntBASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AC011487.3-201ENST00000593607 453 ntBASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AP002360.3-201ENST00000607673 710 ntBASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AC006566.1-201ENST00000608943 513 ntBASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 TUG1_1.1-201ENST00000610654 145 ntBASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX13Q9Y5W8 AL365440.1-201ENST00000436135 2167 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 RNU6-1078P-201ENST00000364522 103 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 RHOT1P2-201ENST00000366423 333 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 MIR135A2-201ENST00000384854 100 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 MIR93-201ENST00000385024 80 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 MIR513A2-201ENST00000385249 127 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 FCF1P10-201ENST00000407590 479 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 RNA5SP104-201ENST00000410989 118 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC004552.1-201ENST00000419089 348 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC092832.1-201ENST00000422934 400 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC244505.5-201ENST00000443639 207 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AL645939.1-201ENST00000453429 797 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 HMGB3P30-201ENST00000457863 606 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AP000873.1-201ENST00000463987 400 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 RPS26P3-201ENST00000470205 348 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC090543.2-201ENST00000483963 348 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 RPL23AP41-201ENST00000484754 458 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC004057.1-201ENST00000485827 348 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 RPL7P23-201ENST00000493874 747 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 HMGB1P22-201ENST00000505315 124 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 OR51K1P-201ENST00000510214 950 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AP000907.2-201ENST00000530827 353 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC087481.2-201ENST00000565492 330 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AL356432.3-201ENST00000568952 465 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 MIR3691-201ENST00000578066 90 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 OR4K8P-201ENST00000578842 1048 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 MIR1269B-201ENST00000580405 75 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC006116.3-201ENST00000592968 361 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AL136363.2-201ENST00000604173 851 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC090578.1-201ENST00000604955 591 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AC010201.1-201ENST00000605051 540 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 RNU6-87P-201ENST00000607561 108 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 Z99129.1-201ENST00000612510 255 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AL589743.7-201ENST00000612637 233 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AL353748.2-201ENST00000622148 471 ntBASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX13Q9Y5W8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.34□□□□□ -1.72
SNX13Q9Y5W8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SNX13Q9Y5W8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.34□□□□□ -1.72
SNX13Q9Y5W8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
SNX13Q9Y5W8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 AL442639.1-201ENST00000625030 1899 ntBASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 RAD23BP2-201ENST00000416003 1207 ntBASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 EI24P1-201ENST00000416584 867 ntBASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 TOMM22P1-201ENST00000418578 312 ntBASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 OR1AA1P-201ENST00000419597 916 ntBASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 AC233728.2-201ENST00000425348 757 ntBASIC4.33□□□□□ -1.72
SNX13Q9Y5W8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms