Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 OR4A15-201ENST00000314706 1035 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 RNA5SP175-201ENST00000364275 119 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 MIR93-201ENST00000385024 80 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AL078595.1-201ENST00000404458 226 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 PPIAP31-201ENST00000405422 495 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 RN7SKP56-201ENST00000410513 331 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 FCF1P9-201ENST00000412546 282 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 HMGB1P11-201ENST00000413899 637 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 RPL21P32-201ENST00000419877 477 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 OR2B8P-201ENST00000432841 938 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AL359073.1-201ENST00000448036 403 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC011352.1-201ENST00000512300 793 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 MTND5P4-201ENST00000514978 288 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AP000790.1-201ENST00000528891 737 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AL389895.1-201ENST00000554127 252 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC106785.1-201ENST00000565935 262 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 MTND1P15-201ENST00000579262 949 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 RPL7P50-201ENST00000600588 727 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC091805.2-201ENST00000603848 235 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 FAM27D1-201ENST00000612308 341 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC091905.2-201ENST00000623143 306 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 NXPH1-205ENST00000602349 1953 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 AC107081.3-201ENST00000612715 2034 ntBASIC4.65□□□□□ -1.67
SSX2IPQ9Y2D8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC114546.3-201ENST00000623582 1734 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 RN7SKP44-201ENST00000363602 316 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 MIR23A-201ENST00000385245 73 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 SNRPEP2-201ENST00000397592 279 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC108032.1-201ENST00000416706 207 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 BTF3P10-201ENST00000433415 495 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 OR4C10P-201ENST00000434991 931 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 MTND1P4-201ENST00000435196 415 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 RPL23AP52-201ENST00000439311 478 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC122718.1-201ENST00000439448 744 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AL353748.1-201ENST00000440753 474 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 SNRPFP4-201ENST00000456366 242 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC093899.1-201ENST00000457984 376 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 FAM133DP-201ENST00000464802 691 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 RPS27AP13-201ENST00000498403 237 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC114981.1-201ENST00000503897 678 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC006499.2-201ENST00000513470 337 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 OR4A45P-201ENST00000529954 901 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 EIF5A2P1-201ENST00000564027 460 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 SNORD39.3-201ENST00000584451 71 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC110743.1-201ENST00000584870 478 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC005771.1-201ENST00000585581 349 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 RBM11P1-201ENST00000604951 799 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC123768.4-201ENST00000616244 701 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC138932.5-201ENST00000617759 563 ntBASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX2IPQ9Y2D8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSX2IPQ9Y2D8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms