Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 U4.3-201ENST00000621047 82 ntBASIC3.15□□□□□ -1.9
SCN11AQ9UI33 AC092184.1-201ENST00000625042 715 ntBASIC3.15□□□□□ -1.9
SCN11AQ9UI33 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SCN11AQ9UI33 ZNF72P-201ENST00000425869 1908 ntBASIC3.15□□□□□ -1.91
SCN11AQ9UI33 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCN11AQ9UI33 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.15□□□□□ -1.91
SCN11AQ9UI33 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SCN11AQ9UI33 FAT1P1-201ENST00000406588 507 ntBASIC3.15□□□□□ -1.91
SCN11AQ9UI33 RNU4-53P-201ENST00000410828 140 ntBASIC3.15□□□□□ -1.91
SCN11AQ9UI33 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.15□□□□□ -1.91
SCN11AQ9UI33 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.15□□□□□ -1.91
SCN11AQ9UI33 RPL21P18-201ENST00000469899 480 ntBASIC3.15□□□□□ -1.91
SCN11AQ9UI33 RNA5SP76-201ENST00000516277 87 ntBASIC3.15□□□□□ -1.91
SCN11AQ9UI33 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.15□□□□□ -1.91
SCN11AQ9UI33 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.15□□□□□ -1.91
SCN11AQ9UI33 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCN11AQ9UI33 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.14□□□□□ -1.91
SCN11AQ9UI33 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCN11AQ9UI33 RNU6-328P-201ENST00000390887 106 ntBASIC3.14□□□□□ -1.91
SCN11AQ9UI33 RN7SKP140-201ENST00000411196 284 ntBASIC3.14□□□□□ -1.91
SCN11AQ9UI33 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN11AQ9UI33 AL606490.7-201ENST00000433136 191 ntBASIC3.14□□□□□ -1.91
SCN11AQ9UI33 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SCN11AQ9UI33 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN11AQ9UI33 AC008565.1-201ENST00000509046 885 ntBASIC3.14□□□□□ -1.91
SCN11AQ9UI33 ACTR6P1-201ENST00000514311 1104 ntBASIC3.14□□□□□ -1.91
SCN11AQ9UI33 OR7K1P-201ENST00000546439 926 ntBASIC3.14□□□□□ -1.91
SCN11AQ9UI33 AC068313.1-201ENST00000604028 1008 ntBASIC3.14□□□□□ -1.91
SCN11AQ9UI33 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.14□□□□□ -1.91
SCN11AQ9UI33 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCN11AQ9UI33 OR4G1P-202ENST00000641173 1788 ntBASIC3.13□□□□□ -1.91
SCN11AQ9UI33 CYCSP45-201ENST00000402289 315 ntBASIC3.13□□□□□ -1.91
SCN11AQ9UI33 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 HIGD1AP10-201ENST00000527837 282 ntBASIC3.13□□□□□ -1.91
SCN11AQ9UI33 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 YWHAZP1-201ENST00000556286 722 ntBASIC3.13□□□□□ -1.91
SCN11AQ9UI33 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 AL162233.1-201ENST00000620014 944 ntBASIC3.13□□□□□ -1.91
SCN11AQ9UI33 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SCN11AQ9UI33 SNORD6-201ENST00000365444 73 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 RNU6-76P-201ENST00000384060 104 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 RPS3AP26-201ENST00000398259 784 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 AC104389.3-201ENST00000445629 235 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 HIGD1AP2-201ENST00000446367 280 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 GAPDHP39-201ENST00000481866 979 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 NDUFB4P9-201ENST00000511646 388 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 AC108471.1-201ENST00000513977 287 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 OR11H5P-201ENST00000554039 926 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 AC015712.3-201ENST00000559380 164 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 DPH3P2-201ENST00000422618 250 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 RPS12P2-201ENST00000439728 269 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 FAM103A2P-201ENST00000444122 354 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 AC026436.1-201ENST00000510537 270 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 AC061975.8-201ENST00000587058 721 ntBASIC3.12□□□□□ -1.91
SCN11AQ9UI33 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.12□□□□□ -1.91
SCN11AQ9UI33 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 LRRC77P-213ENST00000637727 880 ntBASIC3.11□□□□□ -1.91
SCN11AQ9UI33 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SCN11AQ9UI33 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms