Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 AC006023.1-201ENST00000603944 259 ntBASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 ATP5A1P2-202ENST00000616464 443 ntBASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 AC017104.5-201ENST00000637647 639 ntBASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.05□□□□□ -1.76
NPC1L1Q9UHC9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 NACA3P-201ENST00000359690 648 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 RNU6-7-201ENST00000364784 107 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 RNU6-8-201ENST00000365467 107 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 SNORA70E-201ENST00000384492 135 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 RPL21P3-201ENST00000395517 478 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AL049610.1-201ENST00000423374 372 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 ELOCP6-201ENST00000429066 328 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC092170.1-201ENST00000440211 356 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 ELOCP12-201ENST00000458706 328 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC146507.2-201ENST00000460608 476 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 RPL5P23-201ENST00000496040 868 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 OR5G4P-201ENST00000525251 760 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 H3F3AP1-201ENST00000559984 334 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC095057.3-201ENST00000567102 1157 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 MTATP6P2-201ENST00000603319 678 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC007566.2-201ENST00000603642 413 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC112503.2-201ENST00000609005 552 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 CYCSP41-201ENST00000616920 296 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AC006213.5-201ENST00000619673 288 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 AP003400.6-201ENST00000624698 740 ntBASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPC1L1Q9UHC9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 OR5H2-201ENST00000355273 945 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 RNU6-543P-201ENST00000362576 108 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 RNA5SP274-201ENST00000410484 108 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC004022.2-201ENST00000413824 193 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC004987.3-201ENST00000413879 771 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC245054.2-201ENST00000415639 319 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AIMP1P1-201ENST00000418670 937 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC092832.1-201ENST00000422934 400 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC011242.1-201ENST00000433596 1158 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 RPL37P4-201ENST00000448908 268 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 SNRPGP5-201ENST00000456003 220 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 RPL32P14-201ENST00000463196 378 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 PRELID3BP6-201ENST00000503839 571 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 RNA5SP380-201ENST00000517190 98 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC093331.1-201ENST00000521474 169 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 PTP4A1P6-201ENST00000531034 478 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC098483.2-201ENST00000603158 454 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AL392112.1-201ENST00000605115 829 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC103710.3-201ENST00000608157 948 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AC096586.1-201ENST00000610267 561 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 AL590396.2-201ENST00000636511 1041 ntBASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPC1L1Q9UHC9 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 SNORA5B-201ENST00000363786 132 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 MIR525-201ENST00000384978 85 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 SNORA40.4-201ENST00000390971 128 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC112653.1-201ENST00000443851 386 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC096992.1-201ENST00000459808 709 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 RN7SL75P-201ENST00000461926 281 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC010374.2-201ENST00000512933 535 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AP000916.1-201ENST00000533869 835 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC116312.1-201ENST00000606841 314 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC120053.1-201ENST00000607706 736 ntBASIC4.02□□□□□ -1.77
NPC1L1Q9UHC9 AC107294.1-201ENST00000609524 467 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms