Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RPS25P9-201ENST00000435591 252 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AF228730.2-201ENST00000438784 848 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AL606662.1-201ENST00000445763 553 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 MTCO3P2-201ENST00000457365 171 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC010468.1-201ENST00000461022 817 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 RPL7P15-201ENST00000461190 712 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC087879.1-201ENST00000474343 374 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC069499.1-201ENST00000489433 509 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC021146.8-201ENST00000507455 733 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 HMGB1P28-201ENST00000507778 552 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 RNU6-678P-201ENST00000516832 109 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC090888.1-201ENST00000561335 1141 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AL512347.1-201ENST00000566420 503 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 MIR3944-201ENST00000581277 108 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC244505.7-201ENST00000599675 272 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC098679.5-201ENST00000624394 571 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC007671.2-201ENST00000637344 619 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 ZNF542P-204ENST00000482727 1305 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 SNORA63.1-201ENST00000362493 131 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 RNA5SP119-201ENST00000362715 117 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 RNU6-1293P-201ENST00000384077 107 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 MIR1284-201ENST00000408337 120 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC073264.1-201ENST00000411508 416 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC068533.2-201ENST00000411872 306 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AL365338.1-201ENST00000422282 858 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 OR4F13P-201ENST00000428478 931 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AL035407.1-201ENST00000429211 571 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 MTND4P6-201ENST00000438297 472 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AL356535.1-201ENST00000440335 398 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 RPL23AP16-201ENST00000441715 421 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 SLC31A1P1-201ENST00000451221 567 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC110792.2-201ENST00000510278 224 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 RNU1-95P-201ENST00000516357 160 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 RNU1-128P-201ENST00000516704 160 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 RNU6-232P-201ENST00000517144 64 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 ZNF705CP-201ENST00000530515 889 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC087499.8-201ENST00000578406 226 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC020914.4-201ENST00000597690 277 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 VN1R92P-201ENST00000598511 928 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC128687.2-201ENST00000609657 566 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 RNU6-156P-201ENST00000621869 107 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 AC009039.2-201ENST00000624524 529 ntBASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HDAC6Q9UBN7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AP002001.2-201ENST00000529025 1469 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms