Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC233279.1-201ENST00000455300 423 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 snoU109.4-201ENST00000458953 143 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC078857.1-201ENST00000469870 667 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RPS17P11-201ENST00000474297 293 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RNU6-416P-201ENST00000516265 103 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 IGLVIV-65-201ENST00000517313 360 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RAB9BP1-201ENST00000519581 626 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC112191.2-201ENST00000522428 333 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AL355836.1-201ENST00000555951 870 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 TVP23BP1-201ENST00000557500 617 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 TRAV28-201ENST00000557548 323 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 ATP5F1P7-201ENST00000567330 760 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 SNORD39.3-201ENST00000584451 71 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AL356280.1-201ENST00000603614 379 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC124312.4-201ENST00000605533 310 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AL049781.1-201ENST00000623195 3585 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC027309.3-201ENST00000623419 351 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
CDC42SE1Q9NRR8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 PABPC1P6-201ENST00000445594 1829 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 NUP58P1-201ENST00000502546 1738 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 MTCO1P6-201ENST00000481192 1384 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AL590240.1-201ENST00000334118 313 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RNU1-85P-201ENST00000364127 164 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-461P-201ENST00000364195 107 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 SNORD115-48-201ENST00000364764 76 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RNA5SP427-201ENST00000365323 119 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-301P-201ENST00000384277 107 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RPL23AP59-201ENST00000399415 461 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RSL24D1P1-201ENST00000404972 493 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AL355497.1-201ENST00000406262 551 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-77P-201ENST00000410554 91 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-193P-201ENST00000410977 107 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 MTND1P23-201ENST00000416931 372 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC069213.2-201ENST00000420238 366 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 TMEM167AP1-201ENST00000423409 219 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AL138479.1-201ENST00000426913 484 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 KRT18P53-201ENST00000431919 117 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 MTND4LP10-201ENST00000435146 291 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 TPTE2P1-204ENST00000435256 593 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AL590762.3-201ENST00000436372 640 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC005154.2-201ENST00000438110 379 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC004866.2-201ENST00000438285 481 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RNU7-26P-201ENST00000458980 63 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RN7SL177P-201ENST00000476596 299 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RPS4XP1-201ENST00000482189 787 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RPL7P38-201ENST00000488396 739 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC021006.1-201ENST00000489849 553 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RN7SL604P-201ENST00000492589 296 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 OR52A4P-203ENST00000498233 1014 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC022695.1-201ENST00000522089 237 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 IGJP1-201ENST00000522682 475 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AP001781.1-201ENST00000530977 207 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC025918.2-201ENST00000558683 763 ntBASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC42SE1Q9NRR8 AC010546.1-201ENST00000569391 485 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms