Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC245517.5-201ENST00000611529 162 ntBASIC1.92□□□□□ -2.1
SMCO4Q9NRQ5 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SMCO4Q9NRQ5 TANK-205ENST00000405852 2155 ntTSL 5 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AL109809.4-201ENST00000603520 2185 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 TAS2R15P-201ENST00000390674 928 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 RN7SKP27-201ENST00000410684 333 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 TRGV7-201ENST00000427089 353 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AL445584.1-201ENST00000431451 330 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 RPS24P8-201ENST00000431490 402 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC112492.1-201ENST00000449607 712 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC022493.1-201ENST00000492984 337 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC114322.1-201ENST00000506771 926 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 VN1R85P-201ENST00000601587 426 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 BNIP3P11-201ENST00000603878 563 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 MTCO1P8-201ENST00000416914 1523 ntBASIC1.91□□□□□ -2.1
SMCO4Q9NRQ5 ZNF658B-202ENST00000615961 3375 ntBASIC1.9□□□□□ -2.1
SMCO4Q9NRQ5 AC010733.2-201ENST00000589496 5702 ntBASIC1.9□□□□□ -2.1
SMCO4Q9NRQ5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 SNORD114-30-201ENST00000364448 72 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 RNU4-7P-201ENST00000364758 141 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 SNORA54-201ENST00000384281 123 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 MIR524-201ENST00000385242 87 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC092427.1-202ENST00000430569 476 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 IPO7P1-201ENST00000442031 636 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 RAB28P3-201ENST00000448325 597 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 MTCO3P35-201ENST00000485582 781 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC008413.1-201ENST00000511864 177 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC108471.1-201ENST00000513977 287 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 HMGB1P23-201ENST00000518743 568 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 OR6C73P-201ENST00000546432 358 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 MIR5004-201ENST00000579078 107 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 SS18L2P2-201ENST00000583960 235 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC010620.2-201ENST00000600135 313 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC112230.1-201ENST00000604342 547 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 NF1P10-201ENST00000613227 742 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC010435.1-201ENST00000623353 1177 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 MIR203B-201ENST00000636080 86 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 TAB3P1-202ENST00000452645 1634 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 AC000403.1-201ENST00000613696 3585 ntBASIC1.9□□□□□ -2.11
SMCO4Q9NRQ5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 RNU1-33P-201ENST00000364249 162 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 SNORA48.5-201ENST00000391143 135 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC073264.1-201ENST00000411508 416 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 TRGV6-201ENST00000417928 299 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC091390.3-201ENST00000426478 338 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC083906.5-201ENST00000503722 328 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 MTATP6P22-201ENST00000507369 598 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 MTND4LP31-201ENST00000514859 294 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC009812.2-201ENST00000517657 457 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 CSNK1A1P1-202ENST00000563423 981 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC007224.1-201ENST00000564410 144 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 FAM106CP-201ENST00000582212 507 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AL121772.2-201ENST00000614331 297 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMCO4Q9NRQ5 AC099654.7-201ENST00000635788 2127 ntBASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMCO4Q9NRQ5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms