Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL049734.2-201ENST00000441066 616 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC245028.2-201ENST00000458673 253 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-329P-201ENST00000459618 107 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RPS21P4-201ENST00000487122 248 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RN7SL591P-201ENST00000496150 292 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RPL38P4-201ENST00000502376 214 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 TMEM248P1-201ENST00000510579 951 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RNA5SP337-201ENST00000517007 109 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 NARSP2-201ENST00000518524 679 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC100784.1-201ENST00000522790 310 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 ZNF705CP-201ENST00000530515 889 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AP000907.2-201ENST00000530827 353 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC027369.5-201ENST00000533838 755 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC021646.1-201ENST00000605469 484 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AL355802.3-201ENST00000607571 545 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC126915.2-201ENST00000610957 190 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 CR392039.4-201ENST00000624968 501 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AL133216.2-202ENST00000634512 349 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC135068.12-201ENST00000637370 931 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC107081.3-201ENST00000612715 2034 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 RPL23P2-201ENST00000320371 421 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-996P-201ENST00000365438 107 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 SNORA4.3-201ENST00000365564 137 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-43P-201ENST00000384302 107 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AL583835.1-201ENST00000399570 407 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AL133384.1-201ENST00000412744 351 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 COX5BP7-201ENST00000414780 274 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 NCOR1P3-201ENST00000420479 303 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC093655.2-201ENST00000425735 631 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 SRIP2-201ENST00000428470 166 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 RPL23AP74-201ENST00000437246 471 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 TCEA1P1-201ENST00000449716 880 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AP1S2P1-201ENST00000457344 379 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 RPS18P6-201ENST00000476880 458 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 BX284632.1-201ENST00000478218 541 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AL163973.1-201ENST00000484753 577 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC005912.1-201ENST00000495392 255 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 RPS4XP20-201ENST00000505751 772 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 TTC39CP1-201ENST00000512513 755 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.691-201ENST00000516611 103 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AP006245.2-201ENST00000522004 300 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 ELOCP31-201ENST00000540463 467 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 LSM6P2-201ENST00000552208 177 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AP001029.3-201ENST00000588063 596 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC008814.1-201ENST00000603797 406 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC010591.1-201ENST00000603941 649 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 AC118658.2-201ENST00000618697 459 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 OR2L1P-202ENST00000641567 1023 ntBASIC4.6□□□□□ -1.67
SEC61A2Q9H9S3 ASNSP3-201ENST00000451989 1306 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms