Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 RPL31P50-201ENST00000471002 296 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.24□□□□□ -1.73
CLPBQ9H078 AC104164.2-201ENST00000496953 495 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.24□□□□□ -1.73
CLPBQ9H078 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.24□□□□□ -1.73
CLPBQ9H078 AL592156.1-201ENST00000508758 304 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 AC109458.1-201ENST00000508858 316 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 RNA5SP519-201ENST00000516480 119 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 MIR2116-201ENST00000517221 80 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.24□□□□□ -1.73
CLPBQ9H078 AC068587.4-201ENST00000533893 186 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.24□□□□□ -1.73
CLPBQ9H078 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.24□□□□□ -1.73
CLPBQ9H078 PCMTD1P2-201ENST00000565017 355 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.24□□□□□ -1.73
CLPBQ9H078 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.24□□□□□ -1.73
CLPBQ9H078 AC141257.3-201ENST00000572906 215 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.24□□□□□ -1.73
CLPBQ9H078 AP001981.2-201ENST00000603241 418 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 AL161729.3-201ENST00000603533 673 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 AC025588.3-201ENST00000604182 274 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 AL158063.1-201ENST00000615349 536 ntBASIC4.24□□□□□ -1.73
CLPBQ9H078 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
CLPBQ9H078 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLPBQ9H078 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLPBQ9H078 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLPBQ9H078 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLPBQ9H078 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.23□□□□□ -1.73
CLPBQ9H078 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 AL022578.1-201ENST00000439330 1433 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 MAPK10-253ENST00000641010 4072 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLPBQ9H078 RNA5SP388-201ENST00000362584 119 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 MIR1179-201ENST00000408703 91 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 RN7SKP266-201ENST00000410232 287 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 RN7SKP235-201ENST00000410662 305 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.23□□□□□ -1.73
CLPBQ9H078 FNDC3CP-201ENST00000420795 1155 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLPBQ9H078 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.23□□□□□ -1.73
CLPBQ9H078 BTF3P10-201ENST00000433415 495 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AL356276.2-201ENST00000435919 558 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 LARP1BP3-201ENST00000437229 869 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 MUPP-201ENST00000438111 566 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 OR2A20P-203ENST00000498397 1268 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 AC146944.2-203ENST00000502493 354 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 AC108145.1-201ENST00000503770 153 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.23□□□□□ -1.73
CLPBQ9H078 MTND5P13-201ENST00000513046 1079 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 AC139495.1-202ENST00000513164 354 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 OR8L1P-201ENST00000534005 955 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.23□□□□□ -1.73
CLPBQ9H078 CENPUP2-201ENST00000555897 1186 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 MIR4458-201ENST00000578872 75 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AP001180.3-201ENST00000582221 145 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.23□□□□□ -1.73
CLPBQ9H078 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.23□□□□□ -1.73
CLPBQ9H078 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 AC090229.1-201ENST00000590983 1609 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 NUP58P1-201ENST00000502546 1738 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.23□□□□□ -1.73
CLPBQ9H078 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLPBQ9H078 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLPBQ9H078 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CLPBQ9H078 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLPBQ9H078 OR11H5P-202ENST00000641612 1325 ntBASIC4.22□□□□□ -1.73
CLPBQ9H078 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.22□□□□□ -1.73
CLPBQ9H078 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLPBQ9H078 AC097714.1-201ENST00000511272 1647 ntBASIC4.22□□□□□ -1.73
CLPBQ9H078 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLPBQ9H078 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLPBQ9H078 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLPBQ9H078 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLPBQ9H078 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLPBQ9H078 RNU1-14P-201ENST00000362759 152 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms