Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 SLC2A13P1-201ENST00000531560 322 ntBASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 HSPE1P5-201ENST00000561489 272 ntBASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 MIR3921-201ENST00000577308 85 ntBASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 COX6CP3-201ENST00000580869 223 ntBASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 AL138880.2-201ENST00000616214 239 ntBASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 AL591424.2-201ENST00000617023 128 ntBASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 AC123767.1-202ENST00000620407 817 ntBASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 AC104985.3-201ENST00000623479 597 ntBASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4AQ9BY43 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 SNRPEP3-201ENST00000338402 276 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AL356131.1-201ENST00000405826 414 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 CCDC58P2-201ENST00000417131 366 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 GTF2IP3-201ENST00000433887 494 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC007389.2-201ENST00000434630 306 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 TBCAP1-201ENST00000436520 327 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 VN1R25P-201ENST00000443385 738 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 MTCO2P25-201ENST00000447065 681 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC112492.1-201ENST00000449607 712 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 VN1R40P-201ENST00000455196 941 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 U3.44-201ENST00000458938 192 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 RPL21P8-201ENST00000465083 535 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 RN7SL323P-201ENST00000494712 295 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 MTND4LP31-201ENST00000514859 294 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC103783.1-201ENST00000520506 373 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC118942.1-201ENST00000529674 1035 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC010198.2-201ENST00000550612 259 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 MED28P6-201ENST00000558776 231 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 RN7SL703P-201ENST00000578485 302 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC008962.1-201ENST00000605729 304 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC009570.1-201ENST00000609599 745 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC005344.1-201ENST00000613391 459 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AC104763.3-201ENST00000613765 618 ntBASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHMP4AQ9BY43 AP004289.2-201ENST00000444413 1457 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHMP4AQ9BY43 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 RNU6-882P-201ENST00000391025 103 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 SNRPEP2-201ENST00000397592 279 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHMP4AQ9BY43 Z98941.1-201ENST00000407764 100 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 RNA5SP104-201ENST00000410989 118 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 SNORA57.3-201ENST00000411095 141 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 RPL36AP36-201ENST00000418616 301 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 MTCO2P5-201ENST00000422621 426 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 TMEM167AP1-201ENST00000423409 219 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 USP9YP36-201ENST00000424581 829 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 RABEPKP1-201ENST00000440529 1026 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 RRM2P4-201ENST00000441721 562 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 AL358794.1-201ENST00000445689 381 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 VN1R104P-201ENST00000505115 1009 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 AC025554.1-201ENST00000505641 188 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 SNORA31.1-201ENST00000515993 133 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 SNORA31.5-201ENST00000516190 133 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 AC069304.2-201ENST00000605154 435 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 AP003392.5-201ENST00000607857 415 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5□□□□□ -1.61
CHMP4AQ9BY43 AC073348.1-201ENST00000623002 331 ntBASIC5□□□□□ -1.61
CHMP4AQ9BY43 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHMP4AQ9BY43 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHMP4AQ9BY43 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHMP4AQ9BY43 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHMP4AQ9BY43 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 RHOT1P2-201ENST00000366423 333 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 MIR513A2-201ENST00000385249 127 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 HIGD1AP11-201ENST00000438361 280 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AL353748.1-201ENST00000440753 474 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 ARPC3P5-201ENST00000448802 534 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms