Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.9□□□□□ -1.63
SSBP4Q9BWG4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SSBP4Q9BWG4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.9□□□□□ -1.63
SSBP4Q9BWG4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SSBP4Q9BWG4 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP4Q9BWG4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP4Q9BWG4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP4Q9BWG4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AL359976.1-201ENST00000418655 3528 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 GMFG-201ENST00000253054 616 ntTSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 U3.1-201ENST00000362500 215 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 SNORA70.5-201ENST00000365519 135 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 RNU6-729P-201ENST00000384399 107 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 SNORA22C-201ENST00000384614 134 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 Y_RNA.581-201ENST00000391017 97 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 RNU6-754P-201ENST00000391166 107 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AL133260.1-201ENST00000405720 405 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 Y_RNA.629-201ENST00000411368 105 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC069213.2-201ENST00000420238 366 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 RPS15AP6-201ENST00000420703 385 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC092066.1-201ENST00000425131 317 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC007365.2-201ENST00000428806 458 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC006946.1-201ENST00000429106 328 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC073063.1-201ENST00000434352 607 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC007389.2-201ENST00000434630 306 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AL356133.1-201ENST00000444762 372 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 Z95327.1-201ENST00000446082 482 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 NUTF2P3-201ENST00000448540 384 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 TPT1P13-201ENST00000449760 499 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC008620.1-201ENST00000468453 592 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC004453.1-201ENST00000487895 408 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 RPL23AP80-201ENST00000495605 424 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC074250.1-201ENST00000511117 192 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 RNA5SP400-201ENST00000517155 111 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 FTH1P11-201ENST00000517577 551 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC073916.1-201ENST00000545095 130 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC116158.1-201ENST00000560231 2129 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 BOLA2P1-201ENST00000584794 232 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC012175.1-201ENST00000603755 531 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AL161420.1-201ENST00000619393 264 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC087893.2-201ENST00000623272 255 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC110801.1-201ENST00000623590 212 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC004158.1-201ENST00000564508 4319 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 RLIMP1-201ENST00000339626 1680 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC010401.2-201ENST00000575137 4934 ntBASIC4.89□□□□□ -1.63
SSBP4Q9BWG4 AC116667.1-201ENST00000604855 2072 ntBASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 ZNF299P-201ENST00000406845 1804 ntBASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 RNU1-130P-201ENST00000363930 160 ntBASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 RNU6-1303P-201ENST00000364841 107 ntBASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 RNU1-55P-201ENST00000365510 158 ntBASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSBP4Q9BWG4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms