Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
PKP4Q99569 Z99496.1-201ENST00000469424 1477 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AC066616.2-201ENST00000559334 1481 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.98□□□□□ -1.77
PKP4Q99569 AC109315.1-201ENST00000584143 1347 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PKP4Q99569 AL359893.1-201ENST00000447628 1580 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PKP4Q99569 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PKP4Q99569 AL157700.1-201ENST00000561973 1432 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PKP4Q99569 OR11H4-201ENST00000315409 1082 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.98□□□□□ -1.77
PKP4Q99569 RNU6-621P-201ENST00000364752 109 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 Y_RNA.311-201ENST00000365068 96 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PKP4Q99569 AC068538.1-201ENST00000376856 336 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PKP4Q99569 RNU6-441P-201ENST00000384545 106 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 Y_RNA.553-201ENST00000384670 102 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 RNU6-253P-201ENST00000384730 105 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 TPT1P2-201ENST00000413105 503 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AF274854.1-201ENST00000413236 615 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AL161449.1-201ENST00000414531 1199 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.98□□□□□ -1.77
PKP4Q99569 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.98□□□□□ -1.77
PKP4Q99569 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.98□□□□□ -1.77
PKP4Q99569 AL049610.1-201ENST00000423374 372 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 OR5BE1P-201ENST00000425977 939 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 MTCYBP39-201ENST00000437562 491 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.98□□□□□ -1.77
PKP4Q99569 AC093155.1-201ENST00000440164 826 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AP000936.2-201ENST00000447151 681 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 MTND1P16-201ENST00000465177 898 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PKP4Q99569 NCOR1P1-202ENST00000486162 291 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 RPL29P14-201ENST00000495837 428 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 HSPE1P23-201ENST00000509838 286 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.98□□□□□ -1.77
PKP4Q99569 RNU6-1225P-201ENST00000516336 65 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 MTND1P5-201ENST00000517906 940 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AC106038.2-201ENST00000520706 568 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.98□□□□□ -1.77
PKP4Q99569 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PKP4Q99569 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.98□□□□□ -1.77
PKP4Q99569 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.98□□□□□ -1.77
PKP4Q99569 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.98□□□□□ -1.77
PKP4Q99569 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.98□□□□□ -1.77
PKP4Q99569 AC012435.1-202ENST00000568772 240 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AC011260.1-201ENST00000578420 472 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.98□□□□□ -1.77
PKP4Q99569 AC008638.3-201ENST00000603341 463 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AL451044.1-201ENST00000604867 238 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AL136981.2-201ENST00000617319 734 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 AC009878.1-201ENST00000621819 340 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 MIR6810-201ENST00000622701 70 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 OR5BE1P-202ENST00000641168 1176 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PKP4Q99569 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.98□□□□□ -1.77
PKP4Q99569 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.98□□□□□ -1.77
PKP4Q99569 EXOC5P1-201ENST00000510543 1969 ntBASIC3.98□□□□□ -1.77
PKP4Q99569 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PKP4Q99569 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PKP4Q99569 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKP4Q99569 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKP4Q99569 AP001486.2-201ENST00000561652 5113 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PKP4Q99569 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.97□□□□□ -1.77
PKP4Q99569 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKP4Q99569 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
PKP4Q99569 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PKP4Q99569 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PKP4Q99569 SNORD35B-201ENST00000363660 87 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 SNORD74.4-201ENST00000364129 80 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 RNA5SP189-201ENST00000364920 115 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKP4Q99569 RNU6-1226P-201ENST00000384317 107 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 RPS15AP38-201ENST00000413110 372 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 OFD1P18Y-201ENST00000420889 959 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 AC244098.2-201ENST00000422068 99 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 AC092017.2-201ENST00000427600 362 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 MED14P1-201ENST00000430517 648 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP4Q99569 AL356276.2-201ENST00000435919 558 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.97□□□□□ -1.77
PKP4Q99569 AL138799.3-201ENST00000438968 350 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 RPS4XP4-201ENST00000443195 763 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP4Q99569 RPL38P1-201ENST00000460914 211 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 ACTG1P13-201ENST00000486987 1043 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 AL024509.2-201ENST00000493462 493 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.97□□□□□ -1.77
PKP4Q99569 LTV1P1-201ENST00000510683 1237 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 NDUFB4P9-201ENST00000511646 388 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 AC091965.2-201ENST00000512324 613 ntBASIC3.97□□□□□ -1.77
PKP4Q99569 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms