Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC239868.2-201ENST00000564237 4527 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 MAPK10-253ENST00000641010 4072 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC008033.1-201ENST00000216407 1162 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 MIR9-2-201ENST00000384838 87 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AL021331.1-201ENST00000402817 582 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 RNU6-1140P-201ENST00000410517 106 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 RPS3AP9-201ENST00000417027 792 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 SKA2P1-201ENST00000425592 390 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC005345.1-201ENST00000431868 217 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC096775.1-201ENST00000437724 448 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 RPL5P32-201ENST00000454085 879 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AL133244.1-201ENST00000456007 258 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AP002884.2-201ENST00000471647 395 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 RPL7P23-201ENST00000493874 747 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 SLC25A14P1-201ENST00000502867 901 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.719-201ENST00000517156 106 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 CYCSP40-201ENST00000575927 294 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC024560.3-201ENST00000608482 349 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC139792.3-201ENST00000623525 224 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AL512643.1-201ENST00000635735 524 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AL033543.1-201ENST00000623440 13454 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.146-201ENST00000363549 102 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 RNA5SP105-201ENST00000391123 113 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 USP9YP13-201ENST00000417797 480 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC019097.1-201ENST00000424783 735 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC244505.5-201ENST00000443639 207 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 HMGB3P6-201ENST00000444896 598 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 OSTCP1-201ENST00000455507 450 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 HSPE1P22-201ENST00000456856 327 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 HMGB3P17-201ENST00000504195 649 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 MTCO3P7-201ENST00000510008 774 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 DUXAP2-201ENST00000519198 589 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 OR4C2P-201ENST00000530855 1064 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC009237.13-201ENST00000603193 276 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 MTCO3P22-201ENST00000603219 784 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC092807.2-201ENST00000609367 243 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC098679.5-201ENST00000624394 571 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 OR1S1-201ENST00000624470 978 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 AC012442.3-202ENST00000636742 206 ntBASIC1.53□□□□□ -2.16
HMCN1Q96RW7 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMCN1Q96RW7 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms