Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC092162.3-201ENST00000624511 1624 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHFRQ96EP1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHFRQ96EP1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC108467.2-201ENST00000617640 1597 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AL672167.1-204ENST00000641875 3017 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 RNU5F-6P-201ENST00000362979 116 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 RN7SKP227-201ENST00000364445 330 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 RNU6-877P-201ENST00000383868 107 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 SNORD65.1-201ENST00000390889 71 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AMD1P2-201ENST00000412936 992 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC234064.1-201ENST00000436312 247 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AL031663.1-201ENST00000437445 219 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 MTND3P2-201ENST00000438452 342 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 SCARNA10-201ENST00000459255 330 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC087312.1-201ENST00000471411 480 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC107398.1-201ENST00000486904 505 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 RPL39P36-201ENST00000490784 156 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC105914.1-201ENST00000511798 226 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AL049870.4-201ENST00000555741 486 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC107954.1-201ENST00000565906 727 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AL133255.1-201ENST00000606374 441 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC107214.2-201ENST00000608204 634 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC027807.2-201ENST00000616099 408 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AP005019.3-201ENST00000620418 560 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC000123.2-201ENST00000623124 461 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHFRQ96EP1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHFRQ96EP1 AC022893.2-201ENST00000564832 3296 ntBASIC4.75□□□□□ -1.65
CHFRQ96EP1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHFRQ96EP1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.75□□□□□ -1.65
CHFRQ96EP1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 SNORD56.2-201ENST00000363242 71 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 RNU6-483P-201ENST00000384088 108 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 GSTA9P-201ENST00000406231 611 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 MIR1271-201ENST00000408537 86 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC013404.1-201ENST00000413068 249 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 USP9YP13-201ENST00000417797 480 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 PDCL2P1-201ENST00000419302 352 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AL356387.2-201ENST00000422272 243 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 AL009174.1-201ENST00000426577 416 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 SDCBPP1-201ENST00000440192 890 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 YWHAQP9-201ENST00000445891 512 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AL031584.1-201ENST00000447169 754 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC005002.1-201ENST00000447458 540 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 AL033528.1-201ENST00000453780 140 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AL035407.2-201ENST00000454090 378 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AL591473.1-201ENST00000464297 313 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 HMGB3P16-201ENST00000508037 287 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 MTND4LP22-201ENST00000508209 276 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 SAP18P1-201ENST00000512058 390 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 OR5M7P-201ENST00000526140 972 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 OR5AP1P-201ENST00000529730 940 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AL109766.1-201ENST00000555080 552 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 AL020997.2-201ENST00000602607 184 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC091488.1-201ENST00000604239 660 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 BNIP3P10-201ENST00000605360 577 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC090525.3-201ENST00000605601 189 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms