Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 USP9YP18-201ENST00000425912 695 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC009961.2-201ENST00000435771 251 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC073587.1-201ENST00000447093 876 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 TPT1P13-201ENST00000449760 499 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC012671.1-201ENST00000451912 203 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 BX276092.4-201ENST00000452056 248 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 HMGB3P21-201ENST00000452483 547 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 RPS7P7-201ENST00000463499 571 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC111000.3-201ENST00000508057 576 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC090151.1-201ENST00000520784 730 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 RPL21P7-201ENST00000557463 483 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC084783.1-201ENST00000565846 910 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC034268.2-201ENST00000571784 482 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 MIR5096-201ENST00000583713 70 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 OR4G1P-201ENST00000588632 938 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 DUXAP4-201ENST00000603046 613 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC008782.1-201ENST00000603386 430 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC113194.1-201ENST00000606037 500 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC136475.10-201ENST00000620253 385 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC091905.2-201ENST00000623143 306 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 MIR7641-1-201ENST00000627518 61 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC139769.1-204ENST00000472297 1931 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 NEAT1-202ENST00000501122 22743 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 OR56B2P-202ENST00000641377 2453 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 NUP58P1-201ENST00000502546 1738 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 GNG5P1-201ENST00000255500 204 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 Y_RNA.248-201ENST00000364501 109 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 RNU1-63P-201ENST00000383902 164 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 MIR129-1-201ENST00000384972 72 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 ENSAP1-201ENST00000392855 326 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AL359704.1-201ENST00000411586 781 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 PIGFP2-201ENST00000421400 651 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 ISCA1P6-201ENST00000427740 390 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AL596276.1-201ENST00000434465 418 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 MTND4LP10-201ENST00000435146 291 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AL353572.1-201ENST00000442490 417 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 RPL7P15-201ENST00000461190 712 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 MTAPP1-201ENST00000489154 819 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC093853.1-201ENST00000515689 483 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 Y_RNA.672-201ENST00000516289 104 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 RN7SKP277-201ENST00000516895 283 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 RNU2-46P-201ENST00000517038 113 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 RN7SKP92-201ENST00000517266 244 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 CENPUP2-201ENST00000555897 1186 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 MTCO3P24-201ENST00000572729 782 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 HMGN1P30-201ENST00000589286 268 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 YWHAQP7-201ENST00000603536 658 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC245014.2-201ENST00000603689 287 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC010201.1-201ENST00000605051 540 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC246785.4-201ENST00000605374 287 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 AC121334.2-201ENST00000605387 271 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 U6.42-201ENST00000618440 107 ntBASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.19□□□□□ -1.74
CTHRC1Q96CG8 MIR4496-201ENST00000635896 61 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms