Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 RPL38P1-201ENST00000460914 211 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC011979.1-201ENST00000472300 483 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 RN7SL604P-201ENST00000492589 296 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 RPS27AP13-201ENST00000498403 237 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC138701.1-201ENST00000524329 714 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 HSPE1P5-201ENST00000561489 272 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC022146.1-201ENST00000595307 847 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC013444.2-201ENST00000603317 787 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 AL591424.2-201ENST00000617023 128 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 LINC00561-201ENST00000565815 2738 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AL390862.1-201ENST00000635467 1469 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTP4A1Q93096 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTP4A1Q93096 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTP4A1Q93096 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 AL513185.3-201ENST00000433335 1300 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTP4A1Q93096 FRG1BP-201ENST00000278882 761 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTP4A1Q93096 RNA5SP399-201ENST00000364003 117 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 AL031679.1-201ENST00000400616 525 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 PPIAP31-201ENST00000405422 495 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 HSPE1P12-201ENST00000412576 301 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 MTATP6P20-201ENST00000414147 562 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 TMEM167AP1-201ENST00000423409 219 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC233728.2-201ENST00000425348 757 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 OR6K5P-201ENST00000447050 945 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 ARPC3P2-201ENST00000457786 533 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC004801.2-202ENST00000463559 283 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC026979.1-201ENST00000492525 396 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AL139099.1-201ENST00000497398 403 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 PRELID3BP6-201ENST00000503839 571 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 MTATP6P9-201ENST00000515039 680 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 HIGD1AP5-201ENST00000529959 259 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC010198.2-201ENST00000550612 259 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 MTCYBP23-201ENST00000558717 1102 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC055876.1-202ENST00000567053 138 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTP4A1Q93096 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC106900.2-201ENST00000604994 317 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 SNORA51-201ENST00000606420 132 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC092653.1-201ENST00000608509 531 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 MIR6076-201ENST00000617521 113 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTP4A1Q93096 AL121895.2-201ENST00000619558 447 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 OR52H1-202ENST00000641796 1061 ntBASIC3.54□□□□□ -1.84
PTP4A1Q93096 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
PTP4A1Q93096 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTP4A1Q93096 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.53□□□□□ -1.84
PTP4A1Q93096 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTP4A1Q93096 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.53□□□□□ -1.84
PTP4A1Q93096 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTP4A1Q93096 AC126755.2-208ENST00000327792 462 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 AC138969.1-213ENST00000331436 462 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 RNU6-28P-201ENST00000362378 107 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 RPS26P8-201ENST00000393490 348 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 MIR1290-201ENST00000408735 78 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 RNU2-43P-201ENST00000410306 190 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 Y_RNA.625-201ENST00000411256 107 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 RPL7AP73-201ENST00000413490 353 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.53□□□□□ -1.84
PTP4A1Q93096 COX6CP17-201ENST00000421389 185 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.53□□□□□ -1.84
PTP4A1Q93096 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.53□□□□□ -1.84
PTP4A1Q93096 AC007742.1-201ENST00000425789 329 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 C4BPAP2-201ENST00000428434 478 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 MOB1AP1-201ENST00000430903 535 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 ELOCP26-201ENST00000436067 329 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 RAC1P7-201ENST00000445367 377 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 RPS11P1-201ENST00000451072 473 ntBASIC3.53□□□□□ -1.84
PTP4A1Q93096 AC234775.1-201ENST00000454247 670 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms