Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MTCO3P8-201ENST00000453691 755 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC087879.1-201ENST00000474343 374 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC103710.2-201ENST00000609912 942 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AL138960.1-201ENST00000613838 513 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 MIR7973-1-201ENST00000614683 76 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 RPSAP73-201ENST00000614820 330 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 CU639417.4-201ENST00000623928 207 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AL359955.1-201ENST00000455242 3275 ntBASIC6.84□□□□□ -1.32
NKX2-3Q8TAU0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
NKX2-3Q8TAU0 DHX40P1-201ENST00000588725 1412 ntBASIC6.84□□□□□ -1.32
NKX2-3Q8TAU0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
NKX2-3Q8TAU0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC073365.1-203ENST00000641055 1992 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 RNA5SP507-201ENST00000363603 121 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 RNU6-641P-201ENST00000384006 107 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 USP9YP30-201ENST00000430729 455 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 HMGB3P24-201ENST00000433260 622 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC023141.8-201ENST00000442554 208 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC005297.2-201ENST00000450430 606 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 FRG2FP-204ENST00000453982 852 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC011225.1-201ENST00000457751 369 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 SNORA31.6-201ENST00000516241 130 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 RN7SKP283-201ENST00000517197 270 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC007991.1-201ENST00000522680 631 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 AL049872.1-201ENST00000556323 322 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 MIR6837-201ENST00000620884 64 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 MAPK10-270ENST00000641102 3538 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 CASC19-284ENST00000642142 1868 ntBASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NKX2-3Q8TAU0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC108751.5-201ENST00000492880 1336 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC011978.2-201ENST00000569835 2054 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 Y_RNA.314-201ENST00000365114 102 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 Y_RNA.352-201ENST00000365439 102 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 GNG5P2-201ENST00000372054 207 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AL356421.1-201ENST00000403255 413 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 RNU6-735P-201ENST00000410612 107 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 RN7SKP222-201ENST00000410651 315 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 RPL23AP27-201ENST00000415161 451 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 RPL23AP74-201ENST00000437246 471 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 RPS3AP12-201ENST00000443616 753 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AL031584.1-201ENST00000447169 754 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 RPL12P39-201ENST00000455456 496 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC004453.1-201ENST00000487895 408 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 COX6B1P6-201ENST00000522347 255 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 CBX3P4-201ENST00000538909 354 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC091516.1-201ENST00000549191 703 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms