Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SAR1AP4-201ENST00000429225 591 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AL050321.1-201ENST00000432363 400 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC087481.2-201ENST00000565492 330 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC017100.2-201ENST00000584628 355 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 XIAPP1-201ENST00000603162 600 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC008739.3-201ENST00000603262 127 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC079610.2-201ENST00000604818 690 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC128687.1-201ENST00000605304 619 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC131902.3-201ENST00000611767 581 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC006133.1-201ENST00000617106 264 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CLHC1Q8NHS4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AC104446.1-201ENST00000613728 1321 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 RNU6-799P-201ENST00000363567 107 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 ATP5F1P3-201ENST00000397213 657 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AC245054.2-201ENST00000415639 319 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 RPL7P10-201ENST00000417407 739 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 MTND2P21-201ENST00000436242 1042 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 XKRY2-201ENST00000442362 1093 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 CYCSP35-201ENST00000451978 304 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AL590639.1-201ENST00000456484 337 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 RPS29P12-201ENST00000460178 152 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 RPS4XP10-201ENST00000465034 731 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AC104057.1-201ENST00000515547 497 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AC011611.1-201ENST00000552179 197 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 MIR4429-201ENST00000580105 73 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 MIR3158-1-201ENST00000583596 81 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AL355812.1-201ENST00000603215 216 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AC073657.2-201ENST00000605661 303 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 AL392048.1-201ENST00000613946 534 ntBASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.02□□□□□ -1.93
CLHC1Q8NHS4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 RNU1-33P-201ENST00000364249 162 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 MIR670-201ENST00000390142 98 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AL589655.1-201ENST00000405398 482 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 MIR1289-1-201ENST00000408836 144 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AL606495.1-201ENST00000422100 813 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 RPF2P1-201ENST00000424137 906 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC006548.1-201ENST00000427470 102 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 MTCYBP34-201ENST00000439552 670 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 RN7SL75P-201ENST00000461926 281 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 PRDX3P4-201ENST00000470828 747 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 RN7SL293P-201ENST00000481765 281 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC093278.1-201ENST00000494700 600 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 OR5AK3P-201ENST00000527486 1297 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AL157394.1-201ENST00000562983 1224 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 BNIP3P22-201ENST00000593399 556 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC013468.1-201ENST00000608680 598 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC016911.1-201ENST00000613297 452 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AL360181.4-201ENST00000621752 134 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 CR381572.1-201ENST00000625098 102 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 AC068620.4-201ENST00000636730 1182 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms