Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC244205.2-202ENST00000635781 342 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC89Q8N998 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC89Q8N998 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 AC005539.1-201ENST00000443768 1479 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 AL390862.1-201ENST00000635467 1469 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 RNU6-28P-201ENST00000362378 107 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 MIR135A2-201ENST00000384854 100 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 RPS3AP26-201ENST00000398259 784 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 U3.42-201ENST00000408746 214 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 USP9YP11-201ENST00000427537 717 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 RPS17P13-201ENST00000448974 407 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC098824.1-201ENST00000453565 980 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 HMGN2P13-201ENST00000476476 274 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 RN7SL459P-201ENST00000481078 302 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC103783.1-201ENST00000520506 373 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 CYCSP29-201ENST00000533731 318 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC084824.1-201ENST00000550917 1005 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 MIR5186-201ENST00000577504 120 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC013444.2-201ENST00000603317 787 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC009220.3-201ENST00000604318 586 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 AC231657.1-201ENST00000624313 397 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 CUL1P1-201ENST00000509510 2425 ntBASIC4.05□□□□□ -1.76
CCDC89Q8N998 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC89Q8N998 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC89Q8N998 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC89Q8N998 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC89Q8N998 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC89Q8N998 RPL23AP57-201ENST00000332361 466 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 MIR423-201ENST00000362201 94 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC89Q8N998 ATP5F1P4-201ENST00000397288 746 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 ERHP2-201ENST00000402323 299 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 RNU2-43P-201ENST00000410306 190 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 RHEBP3-201ENST00000411920 351 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 RPL27AP8-201ENST00000424277 446 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 EXOSC3P1-201ENST00000448649 500 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 RPS11P1-201ENST00000451072 473 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 RNA5SP310-201ENST00000459084 116 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC010374.2-201ENST00000512933 535 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AP003730.1-201ENST00000524605 285 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC89Q8N998 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC090877.1-201ENST00000561418 344 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 OR4K8P-201ENST00000578842 1048 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 OR4K7P-201ENST00000580232 945 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC022916.3-201ENST00000592961 742 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AL592436.1-201ENST00000605135 558 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AL390208.1-201ENST00000605885 644 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC009570.1-201ENST00000609599 745 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC109809.1-201ENST00000619665 545 ntBASIC4.04□□□□□ -1.76
CCDC89Q8N998 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC89Q8N998 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC89Q8N998 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC89Q8N998 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC89Q8N998 OR5BR1P-201ENST00000524992 1330 ntBASIC4.03□□□□□ -1.76
CCDC89Q8N998 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC89Q8N998 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms