Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC009951.1-201ENST00000623674 2614 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.01□□□□□ -1.45
SIX5Q8N196 RNU6-1284P-201ENST00000363701 100 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 SNORD116-11-201ENST00000383882 92 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 ENSAP1-201ENST00000392855 326 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 RPS12P24-201ENST00000412619 387 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX5Q8N196 AC113412.1-201ENST00000425840 504 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AC093106.2-201ENST00000428212 385 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.01□□□□□ -1.45
SIX5Q8N196 FABP7P2-201ENST00000429946 379 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX5Q8N196 CEACAMP1-201ENST00000434624 1035 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AC019185.1-201ENST00000442718 389 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX5Q8N196 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX5Q8N196 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.01□□□□□ -1.45
SIX5Q8N196 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.01□□□□□ -1.45
SIX5Q8N196 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.01□□□□□ -1.45
SIX5Q8N196 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.01□□□□□ -1.45
SIX5Q8N196 AP001922.4-201ENST00000526967 290 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 PTP4A1P6-201ENST00000531034 478 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 GSTP1P1-201ENST00000548078 319 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 MIR4503-201ENST00000582187 83 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX5Q8N196 AL670379.6-201ENST00000603753 252 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AC008162.1-201ENST00000604718 254 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AL670379.1-201ENST00000604752 252 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AL670379.5-201ENST00000605253 252 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AL670379.8-201ENST00000605353 252 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AL670379.7-201ENST00000605823 252 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AC005014.2-201ENST00000607795 599 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AL121612.2-201ENST00000612261 482 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 AC103705.1-201ENST00000619013 241 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.01□□□□□ -1.45
SIX5Q8N196 AL669831.3-213ENST00000636676 183 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
SIX5Q8N196 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
SIX5Q8N196 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.01□□□□□ -1.45
SIX5Q8N196 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SIX5Q8N196 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SIX5Q8N196 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SIX5Q8N196 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.01□□□□□ -1.45
SIX5Q8N196 AL355834.1-201ENST00000556602 3965 ntBASIC6.01□□□□□ -1.45
SIX5Q8N196 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SIX5Q8N196 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6□□□□□ -1.45
SIX5Q8N196 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6□□□□□ -1.45
SIX5Q8N196 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6□□□□□ -1.45
SIX5Q8N196 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SIX5Q8N196 MAPK10-338ENST00000641647 3362 ntBASIC6□□□□□ -1.45
SIX5Q8N196 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6□□□□□ -1.45
SIX5Q8N196 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6□□□□□ -1.45
SIX5Q8N196 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SIX5Q8N196 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6□□□□□ -1.45
SIX5Q8N196 TNPO1P2-201ENST00000426249 2665 ntBASIC6□□□□□ -1.45
SIX5Q8N196 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6□□□□□ -1.45
SIX5Q8N196 RNU6-593P-201ENST00000364716 112 ntBASIC6□□□□□ -1.45
SIX5Q8N196 SNORA70H-201ENST00000383910 135 ntBASIC6□□□□□ -1.45
SIX5Q8N196 SNORA70J-201ENST00000384182 135 ntBASIC6□□□□□ -1.45
SIX5Q8N196 Y_RNA.452-201ENST00000384202 108 ntBASIC6□□□□□ -1.45
SIX5Q8N196 RNU6-310P-201ENST00000384655 107 ntBASIC6□□□□□ -1.45
SIX5Q8N196 MIR550A3-201ENST00000390735 95 ntBASIC6□□□□□ -1.45
SIX5Q8N196 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SIX5Q8N196 MIR1302-3-201ENST00000408128 138 ntBASIC6□□□□□ -1.45
SIX5Q8N196 RN7SKP279-201ENST00000411383 298 ntBASIC6□□□□□ -1.45
SIX5Q8N196 RPL21P24-201ENST00000413752 448 ntBASIC6□□□□□ -1.45
SIX5Q8N196 HMGA1P8-201ENST00000414130 321 ntBASIC6□□□□□ -1.45
SIX5Q8N196 UBE2FP1-201ENST00000416536 447 ntBASIC6□□□□□ -1.45
SIX5Q8N196 RPS4XP5-201ENST00000419038 768 ntBASIC6□□□□□ -1.45
SIX5Q8N196 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6□□□□□ -1.45
SIX5Q8N196 AL590762.4-201ENST00000425885 253 ntBASIC6□□□□□ -1.45
SIX5Q8N196 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6□□□□□ -1.45
SIX5Q8N196 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6□□□□□ -1.45
SIX5Q8N196 AL162388.1-201ENST00000450912 352 ntBASIC6□□□□□ -1.45
SIX5Q8N196 BX276092.4-201ENST00000452056 248 ntBASIC6□□□□□ -1.45
SIX5Q8N196 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6□□□□□ -1.45
SIX5Q8N196 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6□□□□□ -1.45
SIX5Q8N196 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6□□□□□ -1.45
SIX5Q8N196 AC079140.5-201ENST00000507882 310 ntBASIC6□□□□□ -1.45
SIX5Q8N196 AC008526.1-201ENST00000509149 338 ntBASIC6□□□□□ -1.45
SIX5Q8N196 AC073916.1-201ENST00000545095 130 ntBASIC6□□□□□ -1.45
SIX5Q8N196 DCN-210ENST00000547568 823 ntTSL 3 BASIC6□□□□□ -1.45
SIX5Q8N196 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6□□□□□ -1.45
SIX5Q8N196 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6□□□□□ -1.45
SIX5Q8N196 AC110588.1-201ENST00000559699 137 ntBASIC6□□□□□ -1.45
SIX5Q8N196 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6□□□□□ -1.45
SIX5Q8N196 MIR4680-201ENST00000580906 66 ntBASIC6□□□□□ -1.45
SIX5Q8N196 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6□□□□□ -1.45
SIX5Q8N196 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6□□□□□ -1.45
SIX5Q8N196 AL355812.1-201ENST00000603215 216 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms