Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC005046.1-201ENST00000608515 625 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AL450489.1-201ENST00000612071 468 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 MTND5P6-201ENST00000422338 1798 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AL451074.5-201ENST00000415894 435 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 MRPL50P4-201ENST00000446432 475 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RPL30P9-201ENST00000465586 330 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RPL36AP51-201ENST00000487216 318 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 DYNLL1P6-201ENST00000503440 264 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 SUMO2P4-201ENST00000504193 276 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RNA5SP76-201ENST00000516277 87 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC011492.1-201ENST00000600023 315 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AL451049.1-201ENST00000608672 497 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC131238.1-201ENST00000617135 328 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 MTND5P28-201ENST00000438005 1594 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RNU1-75P-201ENST00000347264 129 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AL450338.1-201ENST00000407987 512 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RPS20P25-201ENST00000412447 352 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 BTG3P1-201ENST00000435859 716 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 TRIM60P18-201ENST00000441518 828 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 NPM1P49-201ENST00000448027 714 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AL354710.1-201ENST00000453641 246 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC147055.1-201ENST00000509261 750 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 TXNP6-201ENST00000510190 310 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC112673.1-201ENST00000513168 575 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 ACTR6P1-201ENST00000514311 1104 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RN7SKP82-201ENST00000516786 223 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC018630.1-201ENST00000541376 925 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 ST13P20-201ENST00000447996 1065 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC108860.1-201ENST00000484521 383 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC008432.1-201ENST00000615912 1320 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC048351.1-201ENST00000420064 602 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 SETP10-201ENST00000424368 814 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 PPIAP17-201ENST00000438507 471 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC092045.1-201ENST00000495716 1231 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 IGLVIV-53-201ENST00000520107 367 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC122134.1-201ENST00000565664 1104 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 VN1R9P-201ENST00000614184 867 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 MIR6733-201ENST00000635723 61 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 SNORD62.1-201ENST00000362541 86 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 RNA5SP274-201ENST00000410484 108 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AL121882.1-201ENST00000422893 417 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AL356320.1-201ENST00000429616 163 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC091179.1-201ENST00000461606 579 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 VN1R17P-201ENST00000472048 1090 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC023043.2-201ENST00000589678 1026 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC093673.2-201ENST00000609674 331 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 CR589904.2-201ENST00000612533 440 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC093010.3-201ENST00000570269 15214 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 RNU1-73P-201ENST00000383971 164 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 MIR181B1-201ENST00000385240 110 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 MORF4L1P6-201ENST00000418771 268 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms