Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 DEFB130D-201ENST00000426866 237 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 ETF1P3-201ENST00000430422 1160 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 RPS24P13-201ENST00000442520 397 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC108938.1-201ENST00000451204 136 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AL109933.2-201ENST00000452651 260 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC083906.5-201ENST00000503722 328 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC093801.2-201ENST00000503966 1050 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 PCBP2P3-201ENST00000509726 843 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC008494.2-201ENST00000514544 370 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AP003066.2-201ENST00000529375 555 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC027104.1-201ENST00000563702 681 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC023825.1-201ENST00000566704 1030 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC010149.2-201ENST00000637608 315 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC132825.7-201ENST00000638744 335 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 MTND4P9-201ENST00000507819 1346 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 MIR22-201ENST00000362190 85 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 BX276092.4-201ENST00000452056 248 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 PRDX3P4-201ENST00000470828 747 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 ARL2BPP6-201ENST00000512757 439 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 COX6CP8-201ENST00000522620 226 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AC083923.1-201ENST00000523708 376 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AC124283.4-201ENST00000581815 456 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 VN1R90P-201ENST00000595717 726 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AC112503.1-201ENST00000608436 391 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 AC104446.1-201ENST00000613728 1321 ntBASIC4.23□□□□□ -1.73
NPHP3Q7Z494 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.23□□□□□ -1.73
NPHP3Q7Z494 ENSAP3-201ENST00000312710 333 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 RPL7P25-201ENST00000404151 721 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC092745.2-202ENST00000411880 369 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AL121890.1-201ENST00000435457 205 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AL096803.2-201ENST00000450032 677 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AL035407.2-201ENST00000454090 378 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 FCF1P6-201ENST00000456841 595 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 ACTG1P13-201ENST00000486987 1043 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC090071.1-201ENST00000507713 644 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 HIGD1AP13-201ENST00000509878 289 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AP003717.3-201ENST00000544832 1180 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 HMGB1P6-201ENST00000569046 646 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AP001180.3-201ENST00000582221 145 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC090312.2-201ENST00000582687 378 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC010680.4-201ENST00000605334 543 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AF129408.1-201ENST00000608767 431 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AL391834.2-201ENST00000609982 546 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC008759.3-201ENST00000613300 508 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC073569.3-201ENST00000619055 682 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AL356118.1-201ENST00000635272 1078 ntBASIC4.22□□□□□ -1.73
NPHP3Q7Z494 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NPHP3Q7Z494 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 U3.15-201ENST00000365398 212 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 RNU6-207P-201ENST00000384137 107 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 SNORD67-201ENST00000390833 111 ntBASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms