Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 RNU6-835P-201ENST00000516974 104 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC034105.3-201ENST00000565294 442 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC084783.1-201ENST00000565846 910 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC093249.1-201ENST00000567049 203 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 MIR3160-1-201ENST00000577972 85 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AP001180.3-201ENST00000582221 145 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 CKS1BP3-201ENST00000600888 237 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AP001005.3-201ENST00000622049 129 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AP006248.2-201ENST00000623309 592 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC134503.1-201ENST00000633048 54 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC009951.1-201ENST00000623674 2614 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC009229.4-201ENST00000623854 1947 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC022893.2-201ENST00000564832 3296 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 OR5J1P-201ENST00000313544 939 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 RNA5SP509-201ENST00000364577 119 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 SNORD115.1-201ENST00000391109 76 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 MIR548P-201ENST00000408336 84 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 RN7SKP32-201ENST00000410167 303 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC092634.6-201ENST00000418558 192 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC023347.2-201ENST00000433994 462 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC108059.2-201ENST00000434626 151 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 SEPT14P3-201ENST00000439401 183 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AL732372.2-207ENST00000445840 183 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 MTCO1P27-201ENST00000448269 226 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 SEPT14P2-201ENST00000453405 183 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC099563.1-201ENST00000456086 418 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 Y_RNA.632-201ENST00000459189 102 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 SEPT14P4-201ENST00000513445 186 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC112206.3-201ENST00000514578 389 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 RNU6-150P-201ENST00000516237 95 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 Y_RNA.719-201ENST00000517156 106 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 FO082796.1-201ENST00000523795 183 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 PHBP17-201ENST00000528576 541 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 ELOCP31-201ENST00000540463 467 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AL109766.1-201ENST00000555080 552 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC068831.4-201ENST00000556118 109 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC055876.1-202ENST00000567053 138 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 RN7SL652P-201ENST00000577769 300 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 SNORA74C-1-201ENST00000580726 201 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC068790.5-201ENST00000602741 355 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC008782.1-201ENST00000603386 430 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC113139.1-201ENST00000605049 239 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC124303.1-201ENST00000605703 360 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC024940.5-201ENST00000622889 474 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC011944.2-201ENST00000624440 683 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC138649.5-201ENST00000637456 137 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 LINC00561-201ENST00000565815 2738 ntBASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNKSR3Q6P9H4 TLK1P1-201ENST00000456760 2440 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 CKAP2P1-201ENST00000555477 2049 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC090017.1-201ENST00000548612 1779 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 MTND5P1-201ENST00000445440 1375 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms