Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF43Q68DV7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
RNF43Q68DV7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF43Q68DV7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF43Q68DV7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF43Q68DV7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF43Q68DV7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 RNU6-238P-201ENST00000363313 106 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RNU6-1188P-201ENST00000363795 107 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RNU4-7P-201ENST00000364758 141 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RNU6-606P-201ENST00000384721 111 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 MIR141-201ENST00000384975 95 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 DBIP1-201ENST00000401435 260 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 HMGB1P17-201ENST00000403495 628 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 CTSL3P-202ENST00000412179 788 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC016397.1-201ENST00000412463 242 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 FAR2P2-201ENST00000413041 594 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RPSAP35-201ENST00000413753 818 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 COX5BP7-201ENST00000414780 274 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 FAR2P4-202ENST00000425399 584 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 PSMD10P3-201ENST00000437000 448 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RPL12P18-201ENST00000437175 325 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 HMGB3P11-201ENST00000440127 604 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC009220.1-201ENST00000451614 275 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 RPL12P25-201ENST00000455592 494 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 RPS29P22-201ENST00000472363 168 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC004062.1-201ENST00000509926 645 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RNU6-976P-201ENST00000516086 111 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RNU6-513P-201ENST00000516104 104 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 SCARNA24.1-201ENST00000516465 137 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 RNU6-635P-201ENST00000516651 102 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 IGKV2D-10-201ENST00000520194 281 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AP001804.3-201ENST00000525146 880 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 MTCO3P23-201ENST00000561363 289 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 MIR3942-201ENST00000585264 109 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC109583.2-201ENST00000617367 129 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 AC093311.1-201ENST00000506586 2021 ntBASIC5.6□□□□□ -1.51
RNF43Q68DV7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF43Q68DV7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF43Q68DV7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC068870.1-201ENST00000563737 2455 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC011493.1-201ENST00000596753 1632 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 HSPA8P18-201ENST00000439846 1928 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 AL049641.1-201ENST00000441055 1948 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 RN7SKP158-201ENST00000410453 326 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AL138799.3-201ENST00000438968 350 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC079781.2-201ENST00000446424 169 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 RN7SL188P-201ENST00000469842 285 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 RPL31P50-201ENST00000471002 296 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 RNU6-1088P-201ENST00000516850 104 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 RNU6-410P-201ENST00000517006 107 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 MIR5690-201ENST00000583739 73 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms