Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 SDCBPP3-201ENST00000419629 891 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AL450263.2-201ENST00000439400 589 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 TRBV8-2-201ENST00000475637 270 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AC068700.1-201ENST00000565862 3754 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 MIR30E-201ENST00000362104 92 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 DEFB109C-201ENST00000382575 264 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 DEFB109B-201ENST00000382656 264 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 RNU6-1140P-201ENST00000410517 106 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 SKP1P1-201ENST00000438081 489 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AC011816.1-201ENST00000441346 546 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 NIPA2P5-201ENST00000452282 464 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AC243972.3-201ENST00000539655 198 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 EEF1B2P4-201ENST00000551398 348 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC110994.2-201ENST00000635481 492 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC027290.2-201ENST00000623210 18662 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 RPL31P12-201ENST00000422587 358 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC008687.2-201ENST00000597865 520 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC012360.2-201ENST00000609349 391 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AL356320.1-201ENST00000429616 163 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC017099.1-201ENST00000448261 1028 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC021146.5-201ENST00000503544 545 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 CR383656.8-201ENST00000549046 145 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC110774.1-201ENST00000623567 2018 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 MIR338-201ENST00000636369 67 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC093663.2-201ENST00000484625 313 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 AC118282.1-201ENST00000506408 765 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 GABRG2-229ENST00000641017 3628 ntBASIC1.51□□□□□ -2.17
UBR4Q5T4S7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBR4Q5T4S7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 MTND5P35-201ENST00000557537 1720 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 MIR193B-201ENST00000384907 83 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 CST9LP2-201ENST00000437612 320 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC234775.1-201ENST00000454247 670 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC006539.3-201ENST00000454258 129 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 DEFB109F-201ENST00000491870 277 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC009101.1-201ENST00000568135 242 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC138915.3-201ENST00000562908 1389 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC104332.2-201ENST00000429959 156 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC004854.1-201ENST00000440356 349 ntBASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.5□□□□□ -2.17
UBR4Q5T4S7 AC090525.1-201ENST00000479116 478 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms