Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNA5SP189-201ENST00000364920 115 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 AL589994.1-201ENST00000404962 340 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 YPEL5P1-201ENST00000419731 367 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 AL390023.1-201ENST00000428836 262 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 AC007563.3-201ENST00000433233 371 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 RPL7P36-201ENST00000444633 681 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 OR4T1P-201ENST00000554933 911 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 RNA5SP108-201ENST00000605921 117 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 MIR6817-201ENST00000615588 66 ntBASIC3.22□□□□□ -1.89
RFX7Q2KHR2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RFX7Q2KHR2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RFX7Q2KHR2 AL355379.1-201ENST00000405542 640 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 PRELID3BP11-201ENST00000414230 479 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 VN1R31P-201ENST00000417498 730 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.21□□□□□ -1.9
RFX7Q2KHR2 AC009965.2-201ENST00000425328 970 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 DPPA2P1-201ENST00000428060 556 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.21□□□□□ -1.9
RFX7Q2KHR2 AL513328.1-201ENST00000446460 224 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 CACYBPP2-201ENST00000453625 678 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 RPL7P5-201ENST00000471472 736 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 AC126182.1-201ENST00000478134 357 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 AC009097.3-201ENST00000563557 1018 ntBASIC3.21□□□□□ -1.9
RFX7Q2KHR2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.21□□□□□ -1.9
RFX7Q2KHR2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 AC002546.1-201ENST00000588041 2504 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 SNORD21-201ENST00000383953 95 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 MIR196B-201ENST00000384852 84 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 RPL31P2-201ENST00000413849 377 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 MYL8P-204ENST00000431574 518 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 AL121890.1-201ENST00000435457 205 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 HSPE1P6-201ENST00000479457 291 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 RPL9P33-201ENST00000484311 566 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 AC108860.1-201ENST00000484521 383 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 AC023050.1-201ENST00000498198 304 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 YWHAEP4-201ENST00000505390 198 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 RNA5SP385-201ENST00000515947 110 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 SNORA31.21-201ENST00000517180 77 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 COX6B1P6-201ENST00000522347 255 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 OR8L1P-201ENST00000534005 955 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 LRRC77P-213ENST00000637727 880 ntBASIC3.2□□□□□ -1.9
RFX7Q2KHR2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RFX7Q2KHR2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 ELOCP6-201ENST00000429066 328 ntBASIC3.19□□□□□ -1.9
RFX7Q2KHR2 ELOCP12-201ENST00000458706 328 ntBASIC3.19□□□□□ -1.9
RFX7Q2KHR2 RPL21P103-201ENST00000479921 488 ntBASIC3.19□□□□□ -1.9
RFX7Q2KHR2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 AC243972.3-201ENST00000539655 198 ntBASIC3.19□□□□□ -1.9
RFX7Q2KHR2 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 MTCO3P13-201ENST00000577757 781 ntBASIC3.19□□□□□ -1.9
RFX7Q2KHR2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 FAM106CP-201ENST00000582212 507 ntBASIC3.19□□□□□ -1.9
RFX7Q2KHR2 AC026790.2-201ENST00000606282 430 ntBASIC3.19□□□□□ -1.9
RFX7Q2KHR2 AC087241.4-201ENST00000612441 480 ntBASIC3.19□□□□□ -1.9
RFX7Q2KHR2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFX7Q2KHR2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC007256.1-201ENST00000392253 2765 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AP000567.1-201ENST00000406413 156 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC009963.1-201ENST00000417265 157 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AL606490.7-201ENST00000433136 191 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 MUPP-201ENST00000438111 566 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 RPL36AP33-201ENST00000450395 310 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC104687.1-201ENST00000485829 412 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC100870.1-201ENST00000522035 505 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC079089.3-201ENST00000603094 673 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC016877.3-201ENST00000606778 504 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms