| NDUFA9 | Q16795 | SUGT1-201 | ENST00000310528 | 14131 nt | APPRIS P3 TSL 1 (best) BASIC | 3.28 | □□□□□ -1.88 | | |
| NDUFA9 | Q16795 | TUBD1-214 | ENST00000592426 | 1460 nt | APPRIS P1 TSL 1 (best) BASIC | 3.28 | □□□□□ -1.88 | | |
| NDUFA9 | Q16795 | PCAT4-201 | ENST00000504263 | 2091 nt | TSL 1 (best) BASIC | 3.28 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | TCP11X1-203 | ENST00000623912 | 1715 nt | TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | CEP44-201 | ENST00000296519 | 4173 nt | APPRIS P1 TSL 1 (best) BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC138915.3-201 | ENST00000562908 | 1389 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL645937.1-201 | ENST00000641739 | 1652 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | ERBIN-212 | ENST00000508515 | 4374 nt | TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC110760.2-201 | ENST00000508031 | 2546 nt | TSL 2 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RNA5SP189-201 | ENST00000364920 | 115 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | MIR217-201 | ENST00000384817 | 110 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RNU6-298P-201 | ENST00000390888 | 96 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | SNORD17-201 | ENST00000390930 | 237 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL133264.1-201 | ENST00000407157 | 562 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RPS7P9-201 | ENST00000414704 | 586 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | USP9YP21-201 | ENST00000420603 | 432 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | OFD1P18Y-201 | ENST00000420889 | 959 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC245052.1-201 | ENST00000426213 | 410 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC024619.1-202 | ENST00000426489 | 495 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RPL31P54-201 | ENST00000429803 | 370 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC005345.1-201 | ENST00000431868 | 217 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL583835.2-201 | ENST00000435483 | 500 nt | TSL 2 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC005019.1-201 | ENST00000436455 | 431 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | PTGES3P1-201 | ENST00000439531 | 483 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | TXNP1-201 | ENST00000441872 | 371 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | COX6CP18-201 | ENST00000448769 | 222 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | SAMSN1-AS1-201 | ENST00000449214 | 840 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC068580.2-201 | ENST00000449749 | 338 nt | TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RPL12P26-201 | ENST00000452430 | 487 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL391704.1-202 | ENST00000453889 | 874 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | LINC00377-201 | ENST00000456588 | 657 nt | TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC010468.1-201 | ENST00000461022 | 817 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL136126.1-201 | ENST00000473603 | 402 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC021205.2-201 | ENST00000480069 | 347 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RPL32P34-201 | ENST00000486380 | 400 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AP000563.1-201 | ENST00000490865 | 758 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | LINC01327-201 | ENST00000498413 | 535 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC078918.1-201 | ENST00000498515 | 228 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | SCOC-206 | ENST00000506322 | 687 nt | APPRIS ALT1 TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | LINC02283-201 | ENST00000511634 | 474 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC016550.2-202 | ENST00000511940 | 581 nt | TSL 2 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | APOOP4-201 | ENST00000513530 | 597 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | OR4R3P-201 | ENST00000525084 | 838 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AP002004.1-202 | ENST00000528437 | 586 nt | TSL 2 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC068768.1-204 | ENST00000544890 | 796 nt | TSL 4 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | LSM6P2-201 | ENST00000552208 | 177 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC005225.1-201 | ENST00000553394 | 937 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL352979.2-201 | ENST00000556988 | 366 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC107954.1-201 | ENST00000565906 | 727 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC093519.1-201 | ENST00000566109 | 298 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC106745.1-201 | ENST00000566798 | 464 nt | TSL 2 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC053481.3-201 | ENST00000577881 | 843 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | CXXC1P1-203 | ENST00000589302 | 746 nt | TSL 3 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | GAS5-AS1-201 | ENST00000602767 | 694 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC025588.3-201 | ENST00000604182 | 274 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC093673.2-201 | ENST00000609674 | 331 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | BTG3-AS1-201 | ENST00000626994 | 552 nt | TSL 4 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | ZNF734P-201 | ENST00000419494 | 1534 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC032011.1-201 | ENST00000611703 | 1549 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | THOC2-201 | ENST00000245838 | 5609 nt | APPRIS P1 TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | CEP85L-202 | ENST00000368488 | 7118 nt | TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL157700.1-201 | ENST00000561973 | 1432 nt | BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC009975.2-201 | ENST00000635306 | 1429 nt | TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | GYPE-201 | ENST00000358615 | 1684 nt | APPRIS P1 TSL 1 (best) BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RASSF8-210 | ENST00000541490 | 5505 nt | APPRIS P1 TSL 5 BASIC | 3.27 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | PTBP2-211 | ENST00000609116 | 12014 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | ZNF37BP-203 | ENST00000452306 | 1352 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | STEAP4-201 | ENST00000301959 | 2321 nt | TSL 1 (best) BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | LINC01416-201 | ENST00000563553 | 2310 nt | TSL 1 (best) BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | FASTKD1-205 | ENST00000453929 | 2791 nt | TSL 2 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | SUCLA2P2-201 | ENST00000417269 | 1309 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | CLOCK-201 | ENST00000309964 | 10304 nt | APPRIS P1 TSL 1 (best) BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | TFPI-202 | ENST00000339091 | 1088 nt | TSL 1 (best) BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | SPRR2D-203 | ENST00000368757 | 800 nt | APPRIS P1 TSL 3 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | EQTN-202 | ENST00000380032 | 1033 nt | APPRIS P3 TSL 1 (best) BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AP002088.1-201 | ENST00000382740 | 395 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | MIR183-201 | ENST00000384958 | 110 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | MT-TC-201 | ENST00000387405 | 66 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RNU6-1176P-201 | ENST00000390955 | 107 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL136133.1-201 | ENST00000413694 | 376 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | OR1AA1P-201 | ENST00000419597 | 916 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC244098.2-201 | ENST00000422068 | 99 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | C1DP1-201 | ENST00000426049 | 402 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL590378.1-201 | ENST00000426818 | 303 nt | TSL 3 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | Z93242.1-201 | ENST00000427102 | 353 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AP000855.1-201 | ENST00000433210 | 636 nt | TSL 2 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AL445259.1-202 | ENST00000434768 | 379 nt | TSL 3 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC068533.3-201 | ENST00000435524 | 404 nt | TSL 5 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | MTCYBP31-201 | ENST00000438855 | 1122 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC044781.1-201 | ENST00000446193 | 570 nt | TSL 3 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | PRDX3P3-201 | ENST00000447765 | 522 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | NPM1P49-201 | ENST00000448027 | 714 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | HMGB3P8-201 | ENST00000449709 | 577 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | RPS4XP2-201 | ENST00000458402 | 793 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | AC138057.1-201 | ENST00000497258 | 696 nt | TSL 3 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | WBP1LP4-201 | ENST00000505043 | 344 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | MTCYBP37-201 | ENST00000510642 | 1133 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | MTCO3P44-201 | ENST00000510977 | 541 nt | BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | LINC02374-202 | ENST00000515222 | 578 nt | TSL 4 BASIC | 3.26 | □□□□□ -1.89 | | |
| NDUFA9 | Q16795 | TET2-AS1-201 | ENST00000515414 | 537 nt | TSL 5 BASIC | 3.26 | □□□□□ -1.89 | | |