Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.74□□□□□ -2.13
RPS28P62857 RPL23AP27-201ENST00000415161 451 ntBASIC1.74□□□□□ -2.13
RPS28P62857 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC1.74□□□□□ -2.13
RPS28P62857 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.74□□□□□ -2.13
RPS28P62857 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RPS28P62857 WARS2P1-201ENST00000429678 537 ntBASIC1.74□□□□□ -2.13
RPS28P62857 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC1.74□□□□□ -2.13
RPS28P62857 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC1.74□□□□□ -2.13
RPS28P62857 USP12PX-201ENST00000432383 1057 ntBASIC1.74□□□□□ -2.13
RPS28P62857 AC090774.1-201ENST00000435925 246 ntBASIC1.74□□□□□ -2.13
RPS28P62857 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC1.74□□□□□ -2.13
RPS28P62857 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC1.74□□□□□ -2.13
RPS28P62857 AC104073.1-201ENST00000451988 151 ntBASIC1.74□□□□□ -2.13
RPS28P62857 MTATP6P7-201ENST00000453315 681 ntBASIC1.74□□□□□ -2.13
RPS28P62857 CABYRP1-201ENST00000465493 1045 ntBASIC1.74□□□□□ -2.13
RPS28P62857 RN7SL655P-201ENST00000486087 298 ntBASIC1.74□□□□□ -2.13
RPS28P62857 HMGN1P16-201ENST00000508308 283 ntBASIC1.74□□□□□ -2.13
RPS28P62857 RNU7-193P-201ENST00000516723 65 ntBASIC1.74□□□□□ -2.13
RPS28P62857 IGHVII-44-2-201ENST00000517728 250 ntBASIC1.74□□□□□ -2.13
RPS28P62857 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC1.74□□□□□ -2.13
RPS28P62857 AC068135.2-201ENST00000569293 1028 ntBASIC1.74□□□□□ -2.13
RPS28P62857 AC092121.1-201ENST00000569452 202 ntBASIC1.74□□□□□ -2.13
RPS28P62857 AC008749.1-201ENST00000597650 306 ntBASIC1.74□□□□□ -2.13
RPS28P62857 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC1.74□□□□□ -2.13
RPS28P62857 SDR42E1P2-201ENST00000614861 481 ntBASIC1.74□□□□□ -2.13
RPS28P62857 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC1.74□□□□□ -2.13
RPS28P62857 SDR42E1P4-201ENST00000620894 481 ntBASIC1.74□□□□□ -2.13
RPS28P62857 AP003355.3-201ENST00000623465 114 ntBASIC1.74□□□□□ -2.13
RPS28P62857 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.74□□□□□ -2.13
RPS28P62857 ASB8-218ENST00000629941 278 ntTSL 5 BASIC1.74□□□□□ -2.13
RPS28P62857 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.74□□□□□ -2.13
RPS28P62857 AC004944.1-201ENST00000517807 3059 ntBASIC1.74□□□□□ -2.13
RPS28P62857 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.73□□□□□ -2.13
RPS28P62857 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPS28P62857 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPS28P62857 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 RNU6-730P-201ENST00000383954 104 ntBASIC1.73□□□□□ -2.13
RPS28P62857 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RPS28P62857 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPS28P62857 ATP5F1P3-201ENST00000397213 657 ntBASIC1.73□□□□□ -2.13
RPS28P62857 AC226101.1-201ENST00000401483 387 ntBASIC1.73□□□□□ -2.13
RPS28P62857 RNA5SP36-201ENST00000410197 133 ntBASIC1.73□□□□□ -2.13
RPS28P62857 HMGB3P2-201ENST00000411913 584 ntBASIC1.73□□□□□ -2.13
RPS28P62857 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC1.73□□□□□ -2.13
RPS28P62857 EIF4EP4-201ENST00000424916 578 ntBASIC1.73□□□□□ -2.13
RPS28P62857 NRBF2P3-201ENST00000432731 865 ntBASIC1.73□□□□□ -2.13
RPS28P62857 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 UBE2FP3-201ENST00000436366 524 ntBASIC1.73□□□□□ -2.13
RPS28P62857 RPS12P2-201ENST00000439728 269 ntBASIC1.73□□□□□ -2.13
RPS28P62857 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 AC068135.1-201ENST00000446164 246 ntBASIC1.73□□□□□ -2.13
RPS28P62857 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 KF459542.1-201ENST00000450908 553 ntBASIC1.73□□□□□ -2.13
RPS28P62857 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 RPL38P1-201ENST00000460914 211 ntBASIC1.73□□□□□ -2.13
RPS28P62857 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 AL049714.1-201ENST00000466686 347 ntBASIC1.73□□□□□ -2.13
RPS28P62857 AC092324.1-201ENST00000468671 324 ntBASIC1.73□□□□□ -2.13
RPS28P62857 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 RPL31P60-201ENST00000478450 367 ntBASIC1.73□□□□□ -2.13
RPS28P62857 AC015724.1-201ENST00000478577 156 ntBASIC1.73□□□□□ -2.13
RPS28P62857 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPS28P62857 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.73□□□□□ -2.13
RPS28P62857 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPS28P62857 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC1.73□□□□□ -2.13
RPS28P62857 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC1.73□□□□□ -2.13
RPS28P62857 CYCSP22-201ENST00000517555 339 ntBASIC1.73□□□□□ -2.13
RPS28P62857 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.73□□□□□ -2.13
RPS28P62857 C1GALT1P3-201ENST00000522049 819 ntBASIC1.73□□□□□ -2.13
RPS28P62857 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC1.73□□□□□ -2.13
RPS28P62857 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPS28P62857 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.73□□□□□ -2.13
RPS28P62857 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 MTCO1P40-201ENST00000574371 625 ntBASIC1.73□□□□□ -2.13
RPS28P62857 MIR4262-201ENST00000578394 54 ntBASIC1.73□□□□□ -2.13
RPS28P62857 OR4K7P-201ENST00000580232 945 ntBASIC1.73□□□□□ -2.13
RPS28P62857 MIR4266-201ENST00000583300 55 ntBASIC1.73□□□□□ -2.13
RPS28P62857 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.73□□□□□ -2.13
RPS28P62857 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPS28P62857 MIMT1-201ENST00000597105 1050 ntBASIC1.73□□□□□ -2.13
RPS28P62857 MTCO3P22-201ENST00000603219 784 ntBASIC1.73□□□□□ -2.13
RPS28P62857 AC018618.2-201ENST00000604770 446 ntBASIC1.73□□□□□ -2.13
RPS28P62857 MEMO1P5-201ENST00000604810 406 ntBASIC1.73□□□□□ -2.13
RPS28P62857 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC1.73□□□□□ -2.13
RPS28P62857 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 AC117503.3-201ENST00000623811 601 ntBASIC1.73□□□□□ -2.13
RPS28P62857 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 AC017104.5-201ENST00000637647 639 ntBASIC1.73□□□□□ -2.13
RPS28P62857 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 AP000553.6-201ENST00000641242 118 ntBASIC1.73□□□□□ -2.13
RPS28P62857 MFSD8-245ENST00000641743 948 ntBASIC1.73□□□□□ -2.13
RPS28P62857 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
RPS28P62857 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms