Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPS3AP61247 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.97□□□□□ -1.77
RPS3AP61247 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 SNORD84-203ENST00000584275 78 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.97□□□□□ -1.77
RPS3AP61247 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 AC113403.1-201ENST00000604910 193 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AC072039.2-201ENST00000608883 439 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AL590282.1-201ENST00000610379 1136 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AL391261.4-201ENST00000616012 481 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AC006338.2-201ENST00000616864 791 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 AL031667.3-201ENST00000620124 655 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.97□□□□□ -1.77
RPS3AP61247 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RPS3AP61247 OR6C71P-202ENST00000641886 1107 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.97□□□□□ -1.77
RPS3AP61247 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RPS3AP61247 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.96□□□□□ -1.77
RPS3AP61247 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.96□□□□□ -1.77
RPS3AP61247 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RPS3AP61247 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 RNU6-289P-201ENST00000364093 107 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 U3.22-201ENST00000391120 215 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 SNORA11F-201ENST00000408237 128 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 MIR320C1-201ENST00000408566 88 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.96□□□□□ -1.78
RPS3AP61247 RPS15AP38-201ENST00000413110 372 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.96□□□□□ -1.78
RPS3AP61247 OR1AA1P-201ENST00000419597 916 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.96□□□□□ -1.78
RPS3AP61247 EIF1P3-201ENST00000423841 334 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.96□□□□□ -1.78
RPS3AP61247 UBE2FP3-201ENST00000436366 524 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AC114495.1-201ENST00000441274 436 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.96□□□□□ -1.78
RPS3AP61247 snoU13.8-201ENST00000458890 104 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 RPS23P7-201ENST00000466210 444 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 RN7SL303P-201ENST00000469773 251 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AC093267.1-201ENST00000489176 961 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 AC002456.2-201ENST00000509356 380 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.96□□□□□ -1.78
RPS3AP61247 MTND1P22-201ENST00000510572 951 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC008802.1-201ENST00000519121 791 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.96□□□□□ -1.78
RPS3AP61247 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.96□□□□□ -1.78
RPS3AP61247 MRPS36P5-201ENST00000551909 298 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RPS3AP61247 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.96□□□□□ -1.78
RPS3AP61247 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 AC008015.1-201ENST00000555505 465 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC087481.2-201ENST00000565492 330 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.96□□□□□ -1.78
RPS3AP61247 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.96□□□□□ -1.78
RPS3AP61247 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.96□□□□□ -1.78
RPS3AP61247 VN1R79P-201ENST00000593540 513 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AC079587.1-201ENST00000603846 277 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 DUXAP11-201ENST00000603858 526 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.96□□□□□ -1.78
RPS3AP61247 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.96□□□□□ -1.78
RPS3AP61247 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 MIR378J-201ENST00000611988 109 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 AL356596.1-201ENST00000624230 379 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 AC008785.1-201ENST00000624475 456 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.96□□□□□ -1.78
RPS3AP61247 AC140479.6-201ENST00000633535 357 ntBASIC3.96□□□□□ -1.78
RPS3AP61247 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.96□□□□□ -1.78
RPS3AP61247 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPS3AP61247 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.96□□□□□ -1.78
RPS3AP61247 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
RPS3AP61247 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.95□□□□□ -1.78
RPS3AP61247 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.95□□□□□ -1.78
RPS3AP61247 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPS3AP61247 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPS3AP61247 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms