Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP54P61011 AC010733.2-201ENST00000589496 5702 ntBASIC3.59□□□□□ -1.83
SRP54P61011 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRP54P61011 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SRP54P61011 RNA5SP258-201ENST00000362750 119 ntBASIC3.59□□□□□ -1.83
SRP54P61011 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SRP54P61011 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP54P61011 HMGN2P8-201ENST00000391458 268 ntBASIC3.59□□□□□ -1.83
SRP54P61011 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.59□□□□□ -1.83
SRP54P61011 RN7SKP285-201ENST00000410137 318 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP54P61011 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP54P61011 C1DP1-201ENST00000426049 402 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.59□□□□□ -1.83
SRP54P61011 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP54P61011 VDAC1P3-201ENST00000434069 851 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC073063.1-201ENST00000434352 607 ntBASIC3.59□□□□□ -1.83
SRP54P61011 TXNP1-201ENST00000441872 371 ntBASIC3.59□□□□□ -1.83
SRP54P61011 RPL21P23-201ENST00000446654 460 ntBASIC3.59□□□□□ -1.83
SRP54P61011 RPL12P26-201ENST00000452430 487 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP54P61011 MTCO3P20-201ENST00000454926 688 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP54P61011 RN7SL293P-201ENST00000481765 281 ntBASIC3.59□□□□□ -1.83
SRP54P61011 RPL23AP44-201ENST00000482216 473 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.59□□□□□ -1.83
SRP54P61011 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP54P61011 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP54P61011 AC093767.1-201ENST00000504523 156 ntBASIC3.59□□□□□ -1.83
SRP54P61011 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP54P61011 RN7SKP13-201ENST00000515933 244 ntBASIC3.59□□□□□ -1.83
SRP54P61011 RNU6-1073P-201ENST00000517182 106 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.59□□□□□ -1.83
SRP54P61011 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.59□□□□□ -1.83
SRP54P61011 MIR5708-201ENST00000579723 85 ntBASIC3.59□□□□□ -1.83
SRP54P61011 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SRP54P61011 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP54P61011 AL445435.1-201ENST00000604232 665 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC011816.2-201ENST00000607089 556 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AL159169.3-201ENST00000608871 561 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC006329.2-201ENST00000611491 394 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC243312.2-201ENST00000623340 601 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AL138960.2-201ENST00000625145 535 ntBASIC3.59□□□□□ -1.83
SRP54P61011 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.59□□□□□ -1.83
SRP54P61011 AC244258.1-201ENST00000637553 1071 ntBASIC3.59□□□□□ -1.83
SRP54P61011 GDI2P1-201ENST00000429312 1336 ntBASIC3.59□□□□□ -1.83
SRP54P61011 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRP54P61011 AC138915.3-201ENST00000562908 1389 ntBASIC3.59□□□□□ -1.83
SRP54P61011 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SRP54P61011 MTCO1P12-201ENST00000414273 1543 ntBASIC3.59□□□□□ -1.84
SRP54P61011 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SRP54P61011 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SRP54P61011 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRP54P61011 SNORD82-201ENST00000365530 70 ntBASIC3.58□□□□□ -1.84
SRP54P61011 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRP54P61011 MIR183-201ENST00000384958 110 ntBASIC3.58□□□□□ -1.84
SRP54P61011 RNU6-298P-201ENST00000390888 96 ntBASIC3.58□□□□□ -1.84
SRP54P61011 Y_RNA.578-201ENST00000390903 88 ntBASIC3.58□□□□□ -1.84
SRP54P61011 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.58□□□□□ -1.84
SRP54P61011 AC245052.5-201ENST00000416320 649 ntBASIC3.58□□□□□ -1.84
SRP54P61011 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.58□□□□□ -1.84
SRP54P61011 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.58□□□□□ -1.84
SRP54P61011 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.58□□□□□ -1.84
SRP54P61011 PRDX3P3-201ENST00000447765 522 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.58□□□□□ -1.84
SRP54P61011 RPS20P24-201ENST00000457473 361 ntBASIC3.58□□□□□ -1.84
SRP54P61011 snoU13.24-201ENST00000458998 104 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC010468.1-201ENST00000461022 817 ntBASIC3.58□□□□□ -1.84
SRP54P61011 RPL21P104-201ENST00000464143 478 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC013828.1-201ENST00000481845 158 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.58□□□□□ -1.84
SRP54P61011 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.58□□□□□ -1.84
SRP54P61011 AC008127.2-201ENST00000549925 1075 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.58□□□□□ -1.84
SRP54P61011 SRGNP1-201ENST00000603392 451 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC128687.1-201ENST00000605304 619 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC091946.2-201ENST00000606105 291 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC090425.2-201ENST00000608818 501 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC092954.1-201ENST00000609121 445 ntBASIC3.58□□□□□ -1.84
SRP54P61011 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
SRP54P61011 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.58□□□□□ -1.84
SRP54P61011 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.58□□□□□ -1.84
SRP54P61011 U6.105-201ENST00000637379 88 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AL392088.2-201ENST00000637607 285 ntBASIC3.58□□□□□ -1.84
SRP54P61011 MIR7153-201ENST00000637758 57 ntBASIC3.58□□□□□ -1.84
SRP54P61011 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.58□□□□□ -1.84
SRP54P61011 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRP54P61011 NUP58P1-201ENST00000502546 1738 ntBASIC3.58□□□□□ -1.84
SRP54P61011 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
SRP54P61011 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.58□□□□□ -1.84
SRP54P61011 AL365440.1-201ENST00000436135 2167 ntBASIC3.58□□□□□ -1.84
SRP54P61011 AC004925.1-201ENST00000624256 2706 ntBASIC3.57□□□□□ -1.84
SRP54P61011 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP54P61011 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SRP54P61011 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP54P61011 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP54P61011 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRP54P61011 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP54P61011 RNA5SP387-201ENST00000364226 106 ntBASIC3.57□□□□□ -1.84
SRP54P61011 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms