Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN6P56747 AP001033.2-201ENST00000609701 1003 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 AC104307.1-201ENST00000616142 196 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 FRG1HP-204ENST00000617940 757 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN6P56747 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN6P56747 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN6P56747 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLDN6P56747 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN6P56747 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN6P56747 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN6P56747 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN6P56747 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN6P56747 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN6P56747 MIR30E-201ENST00000362104 92 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 RNU6-55P-201ENST00000411092 107 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 RNU6-954P-201ENST00000411355 107 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 RNU2-71P-201ENST00000411395 189 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 RPL31P12-201ENST00000422587 358 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN6P56747 SETP5-201ENST00000437270 562 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN6P56747 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN6P56747 AL357552.1-201ENST00000445254 415 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 AC092754.2-201ENST00000463506 460 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 CYCSP20-201ENST00000473154 315 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN6P56747 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN6P56747 AC091826.1-201ENST00000514065 313 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 RNU6-488P-201ENST00000515918 99 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN6P56747 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN6P56747 AP001207.1-201ENST00000524051 481 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN6P56747 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 AC010735.1-201ENST00000567305 1026 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 AC013412.1-201ENST00000610687 192 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 AL356321.1-201ENST00000621360 228 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 PLCE1P1-201ENST00000622094 305 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN6P56747 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN6P56747 AC138915.3-201ENST00000562908 1389 ntBASIC3.07□□□□□ -1.92
CLDN6P56747 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN6P56747 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN6P56747 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN6P56747 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CLDN6P56747 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN6P56747 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN6P56747 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN6P56747 OR5J1P-201ENST00000313544 939 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CLDN6P56747 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 RNU6-629P-201ENST00000384061 103 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 SSXP10-201ENST00000402595 565 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 RPL23AP47-201ENST00000408017 460 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC126124.2-201ENST00000413542 321 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.06□□□□□ -1.92
CLDN6P56747 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN6P56747 AC073310.1-201ENST00000423226 1033 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 ETF1P3-201ENST00000430422 1160 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 AL691517.1-201ENST00000440833 1235 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.06□□□□□ -1.92
CLDN6P56747 ELOCP13-201ENST00000443934 329 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN6P56747 RPL7P52-201ENST00000449200 742 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 RNU7-170P-201ENST00000459303 61 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC010468.1-201ENST00000461022 817 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN6P56747 VN1R104P-201ENST00000505115 1009 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 AC010486.1-201ENST00000511793 424 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.06□□□□□ -1.92
CLDN6P56747 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.06□□□□□ -1.92
CLDN6P56747 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN6P56747 AC109635.4-202ENST00000531666 412 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.06□□□□□ -1.92
CLDN6P56747 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CLDN6P56747 AC011602.1-201ENST00000546484 331 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 GTF3AP2-201ENST00000557014 266 ntBASIC3.06□□□□□ -1.92
CLDN6P56747 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms