Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU5A-2P-201ENST00000384337 116 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 ATP5F1P4-201ENST00000397288 746 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 MTND4P20-201ENST00000424125 869 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC4P56524 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC4P56524 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.22□□□□□ -1.73
HDAC4P56524 TRBV26-201ENST00000456572 344 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.22□□□□□ -1.73
HDAC4P56524 RPL7P19-201ENST00000469948 618 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC4P56524 MTND3P7-201ENST00000474435 343 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.22□□□□□ -1.73
HDAC4P56524 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC4P56524 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.22□□□□□ -1.73
HDAC4P56524 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC4P56524 AC008127.2-201ENST00000549925 1075 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC4P56524 AL512347.1-201ENST00000566420 503 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC022968.1-201ENST00000567372 442 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC025627.2-201ENST00000576220 160 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC011260.1-201ENST00000578420 472 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC067959.1-201ENST00000604334 379 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AL451044.1-201ENST00000604867 238 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC124312.4-201ENST00000605533 310 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC4P56524 AC245008.1-201ENST00000608123 476 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AL391261.4-201ENST00000616012 481 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 U73479.1-201ENST00000618062 168 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC4P56524 AL773545.4-201ENST00000637262 310 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC4P56524 MIR492-201ENST00000638676 116 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 OR8B1P-202ENST00000641132 1178 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 AL513478.4-201ENST00000641636 310 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HDAC4P56524 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HDAC4P56524 PABPC1P7-201ENST00000413177 1513 ntBASIC4.21□□□□□ -1.73
HDAC4P56524 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HDAC4P56524 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HDAC4P56524 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HDAC4P56524 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HDAC4P56524 SNORA70C-201ENST00000384538 135 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC4P56524 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC4P56524 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 RPL31P2-201ENST00000413849 377 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC108032.1-201ENST00000416706 207 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AL356095.1-201ENST00000417217 199 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC092647.1-201ENST00000420654 287 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AL022400.1-201ENST00000423946 935 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC234781.2-201ENST00000426370 994 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 VN1R108P-201ENST00000431580 830 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC4P56524 USP9YP7-201ENST00000436723 430 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HDAC4P56524 AL591503.2-201ENST00000442314 1005 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC4P56524 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 MTND2P19-201ENST00000449129 1012 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 USP9YP32-201ENST00000452432 430 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 SNORA84-201ENST00000459229 133 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC4P56524 BZW1P2-201ENST00000473537 826 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 RPS3AP43-201ENST00000479743 781 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 NCOR1P1-202ENST00000486162 291 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC4P56524 RPF2P2-201ENST00000504693 896 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 MTND1P22-201ENST00000510572 951 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 RNU4-60P-201ENST00000517239 135 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC4P56524 OR5AK1P-201ENST00000524837 922 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.21□□□□□ -1.74
HDAC4P56524 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.21□□□□□ -1.74
HDAC4P56524 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
HDAC4P56524 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC4P56524 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC4P56524 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC4P56524 OR4G1P-201ENST00000588632 938 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC040904.1-201ENST00000590850 223 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC4P56524 AC006539.2-201ENST00000601729 572 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC010738.1-201ENST00000604970 987 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AL591034.3-201ENST00000605511 685 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 AC064807.4-201ENST00000607201 407 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 MIR6867-201ENST00000610636 67 ntBASIC4.21□□□□□ -1.74
HDAC4P56524 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.21□□□□□ -1.74
HDAC4P56524 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms