Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC006116.10-201ENST00000591836 581 ntBASIC3.73□□□□□ -1.81
VCPP55072 VN1R88P-201ENST00000596787 292 ntBASIC3.73□□□□□ -1.81
VCPP55072 KC877982.1-201ENST00000602313 470 ntBASIC3.73□□□□□ -1.81
VCPP55072 AL606834.2-201ENST00000602954 668 ntBASIC3.73□□□□□ -1.81
VCPP55072 U73479.1-201ENST00000618062 168 ntBASIC3.73□□□□□ -1.81
VCPP55072 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
VCPP55072 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCPP55072 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
VCPP55072 RIOK3P1-201ENST00000418778 1528 ntBASIC3.73□□□□□ -1.81
VCPP55072 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
VCPP55072 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
VCPP55072 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCPP55072 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCPP55072 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 RNU5B-1-201ENST00000363286 116 ntBASIC3.72□□□□□ -1.81
VCPP55072 RNU6-1243P-201ENST00000364028 107 ntBASIC3.72□□□□□ -1.81
VCPP55072 RNU6-1257P-201ENST00000384625 110 ntBASIC3.72□□□□□ -1.81
VCPP55072 MIR184-201ENST00000384962 84 ntBASIC3.72□□□□□ -1.81
VCPP55072 RPL5P18-201ENST00000406671 891 ntBASIC3.72□□□□□ -1.81
VCPP55072 U3.39-201ENST00000408569 239 ntBASIC3.72□□□□□ -1.81
VCPP55072 RN7SKP285-201ENST00000410137 318 ntBASIC3.72□□□□□ -1.81
VCPP55072 BX323014.1-201ENST00000412876 237 ntBASIC3.72□□□□□ -1.81
VCPP55072 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.72□□□□□ -1.81
VCPP55072 AL513175.1-201ENST00000431492 780 ntBASIC3.72□□□□□ -1.81
VCPP55072 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.72□□□□□ -1.81
VCPP55072 AC002542.1-201ENST00000440683 193 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC025750.2-201ENST00000442609 450 ntBASIC3.72□□□□□ -1.81
VCPP55072 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.72□□□□□ -1.81
VCPP55072 MTND1P33-201ENST00000446251 917 ntBASIC3.72□□□□□ -1.81
VCPP55072 AL050341.1-201ENST00000447743 313 ntBASIC3.72□□□□□ -1.81
VCPP55072 HMGB3P8-201ENST00000449709 577 ntBASIC3.72□□□□□ -1.81
VCPP55072 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.72□□□□□ -1.81
VCPP55072 BX248409.1-201ENST00000455497 255 ntBASIC3.72□□□□□ -1.81
VCPP55072 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.72□□□□□ -1.81
VCPP55072 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.72□□□□□ -1.81
VCPP55072 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.72□□□□□ -1.81
VCPP55072 AC011825.1-201ENST00000484967 388 ntBASIC3.72□□□□□ -1.81
VCPP55072 HMGB1P38-201ENST00000490557 577 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.72□□□□□ -1.81
VCPP55072 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.72□□□□□ -1.81
VCPP55072 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.72□□□□□ -1.81
VCPP55072 AP000926.4-201ENST00000527351 454 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC124293.1-201ENST00000530034 493 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.72□□□□□ -1.81
VCPP55072 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.72□□□□□ -1.81
VCPP55072 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.72□□□□□ -1.81
VCPP55072 MIR3690-201ENST00000580266 75 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.72□□□□□ -1.81
VCPP55072 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.72□□□□□ -1.81
VCPP55072 AC006023.1-201ENST00000603944 259 ntBASIC3.72□□□□□ -1.81
VCPP55072 AL009028.1-201ENST00000604895 802 ntBASIC3.72□□□□□ -1.81
VCPP55072 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 AC124016.2-201ENST00000610058 665 ntBASIC3.72□□□□□ -1.81
VCPP55072 RMST_8.1-201ENST00000610287 165 ntBASIC3.72□□□□□ -1.81
VCPP55072 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.72□□□□□ -1.81
VCPP55072 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 U4.6-201ENST00000621618 127 ntBASIC3.72□□□□□ -1.81
VCPP55072 PLCE1P1-201ENST00000622094 305 ntBASIC3.72□□□□□ -1.81
VCPP55072 AL049777.1-201ENST00000622740 518 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC092184.1-201ENST00000625042 715 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 AL590396.4-201ENST00000636779 956 ntBASIC3.72□□□□□ -1.81
VCPP55072 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCPP55072 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.72□□□□□ -1.81
VCPP55072 MTND5P28-201ENST00000438005 1594 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC068647.1-201ENST00000489539 2265 ntBASIC3.72□□□□□ -1.81
VCPP55072 AC107081.3-201ENST00000612715 2034 ntBASIC3.71□□□□□ -1.81
VCPP55072 PABPC1P7-201ENST00000413177 1513 ntBASIC3.71□□□□□ -1.82
VCPP55072 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.71□□□□□ -1.82
VCPP55072 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.71□□□□□ -1.82
VCPP55072 RNU6-335P-201ENST00000364563 113 ntBASIC3.71□□□□□ -1.82
VCPP55072 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.82
VCPP55072 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VCPP55072 DSTNP4-201ENST00000399472 474 ntBASIC3.71□□□□□ -1.82
VCPP55072 AL138880.1-201ENST00000405824 642 ntBASIC3.71□□□□□ -1.82
VCPP55072 MIR1250-201ENST00000408098 113 ntBASIC3.71□□□□□ -1.82
VCPP55072 RNU6-77P-201ENST00000410554 91 ntBASIC3.71□□□□□ -1.82
VCPP55072 MTCYBP24-201ENST00000420387 1106 ntBASIC3.71□□□□□ -1.82
VCPP55072 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 NEK4P1-201ENST00000433383 879 ntBASIC3.71□□□□□ -1.82
VCPP55072 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.71□□□□□ -1.82
VCPP55072 SDR42E1P3-201ENST00000438345 502 ntBASIC3.71□□□□□ -1.82
VCPP55072 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.71□□□□□ -1.82
VCPP55072 SEPT14P24-201ENST00000447236 180 ntBASIC3.71□□□□□ -1.82
VCPP55072 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.71□□□□□ -1.82
VCPP55072 CDC42P1-201ENST00000456658 548 ntBASIC3.71□□□□□ -1.82
VCPP55072 RPS4XP13-201ENST00000483219 789 ntBASIC3.71□□□□□ -1.82
VCPP55072 RPL21P13-201ENST00000488305 481 ntBASIC3.71□□□□□ -1.82
VCPP55072 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.71□□□□□ -1.82
VCPP55072 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 AC008885.2-201ENST00000509506 930 ntBASIC3.71□□□□□ -1.82
VCPP55072 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms