Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.73□□□□□ -1.81
PDX1P52945 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.73□□□□□ -1.81
PDX1P52945 RSL24D1P3-201ENST00000449255 495 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.73□□□□□ -1.81
PDX1P52945 ART2BP-201ENST00000453501 499 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.73□□□□□ -1.81
PDX1P52945 RPS15AP17-201ENST00000470598 390 ntBASIC3.73□□□□□ -1.81
PDX1P52945 RPS26P15-201ENST00000488067 348 ntBASIC3.73□□□□□ -1.81
PDX1P52945 RNF138P1-201ENST00000502765 546 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC147055.4-201ENST00000504399 745 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDX1P52945 AP003461.1-201ENST00000528866 78 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.73□□□□□ -1.81
PDX1P52945 MRPS36P5-201ENST00000551909 298 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.73□□□□□ -1.81
PDX1P52945 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.73□□□□□ -1.81
PDX1P52945 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.73□□□□□ -1.81
PDX1P52945 AC025588.3-201ENST00000604182 274 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AL592221.1-201ENST00000605266 382 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC010680.4-201ENST00000605334 543 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC006270.3-201ENST00000605967 1036 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AL360219.1-201ENST00000610230 366 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC078899.5-201ENST00000612475 178 ntBASIC3.73□□□□□ -1.81
PDX1P52945 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDX1P52945 MIR4727-201ENST00000622232 55 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC091953.5-201ENST00000622919 233 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC079416.3-201ENST00000624479 549 ntBASIC3.73□□□□□ -1.81
PDX1P52945 U6.105-201ENST00000637379 88 ntBASIC3.73□□□□□ -1.81
PDX1P52945 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.73□□□□□ -1.81
PDX1P52945 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.73□□□□□ -1.81
PDX1P52945 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDX1P52945 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PDX1P52945 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDX1P52945 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 AL359893.1-201ENST00000447628 1580 ntBASIC3.72□□□□□ -1.81
PDX1P52945 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 AC093908.1-201ENST00000623125 8092 ntBASIC3.72□□□□□ -1.81
PDX1P52945 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PDX1P52945 Y_RNA.169-201ENST00000363745 96 ntBASIC3.72□□□□□ -1.81
PDX1P52945 RNU6-1122P-201ENST00000384449 107 ntBASIC3.72□□□□□ -1.81
PDX1P52945 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 MIR1251-201ENST00000408552 70 ntBASIC3.72□□□□□ -1.81
PDX1P52945 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.72□□□□□ -1.81
PDX1P52945 RPS12P23-201ENST00000419579 400 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.72□□□□□ -1.81
PDX1P52945 MTND5P25-201ENST00000430499 799 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.72□□□□□ -1.81
PDX1P52945 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.72□□□□□ -1.81
PDX1P52945 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 AC092427.1-201ENST00000439177 601 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.72□□□□□ -1.81
PDX1P52945 RPL39P6-201ENST00000448289 150 ntBASIC3.72□□□□□ -1.81
PDX1P52945 ATG12P2-201ENST00000456830 416 ntBASIC3.72□□□□□ -1.81
PDX1P52945 RN7SL271P-201ENST00000487601 295 ntBASIC3.72□□□□□ -1.81
PDX1P52945 RPS3AP22-201ENST00000488297 769 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 AC005798.1-201ENST00000513715 387 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AP001636.2-201ENST00000525517 696 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AP000926.4-201ENST00000527351 454 ntBASIC3.72□□□□□ -1.81
PDX1P52945 OR4A45P-201ENST00000529954 901 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.72□□□□□ -1.81
PDX1P52945 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.72□□□□□ -1.81
PDX1P52945 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.72□□□□□ -1.81
PDX1P52945 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.72□□□□□ -1.81
PDX1P52945 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.72□□□□□ -1.81
PDX1P52945 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 VN1R90P-201ENST00000595717 726 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AL133507.1-201ENST00000605269 557 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AC112220.3-201ENST00000605502 502 ntBASIC3.72□□□□□ -1.81
PDX1P52945 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 AC105429.2-201ENST00000610567 517 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AC096577.2-201ENST00000611455 153 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AC009318.4-201ENST00000620496 486 ntBASIC3.72□□□□□ -1.81
PDX1P52945 AP000676.3-201ENST00000623299 569 ntBASIC3.72□□□□□ -1.81
PDX1P52945 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.72□□□□□ -1.81
PDX1P52945 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 MTND4P34-201ENST00000572715 1371 ntBASIC3.72□□□□□ -1.81
PDX1P52945 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDX1P52945 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.72□□□□□ -1.81
PDX1P52945 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PDX1P52945 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
PDX1P52945 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.71□□□□□ -1.81
PDX1P52945 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
PDX1P52945 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PDX1P52945 AC090229.1-201ENST00000590983 1609 ntBASIC3.71□□□□□ -1.82
PDX1P52945 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDX1P52945 Z73965.1-201ENST00000623412 2297 ntBASIC3.71□□□□□ -1.82
PDX1P52945 OR5H2-201ENST00000355273 945 ntBASIC3.71□□□□□ -1.82
PDX1P52945 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms