Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.55□□□□□ -1.68
NEK3P51956 AC012321.1-201ENST00000561622 1588 ntBASIC4.55□□□□□ -1.68
NEK3P51956 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NEK3P51956 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.55□□□□□ -1.68
NEK3P51956 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.55□□□□□ -1.68
NEK3P51956 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NEK3P51956 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NEK3P51956 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NEK3P51956 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
NEK3P51956 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEK3P51956 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.54□□□□□ -1.68
NEK3P51956 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
NEK3P51956 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NEK3P51956 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NEK3P51956 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NEK3P51956 U3.20-201ENST00000390909 217 ntBASIC4.54□□□□□ -1.68
NEK3P51956 RNU4-25P-201ENST00000410569 230 ntBASIC4.54□□□□□ -1.68
NEK3P51956 TPMTP3-201ENST00000411928 735 ntBASIC4.54□□□□□ -1.68
NEK3P51956 Z97055.1-201ENST00000419730 712 ntBASIC4.54□□□□□ -1.68
NEK3P51956 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 AL365184.2-201ENST00000431139 435 ntBASIC4.54□□□□□ -1.68
NEK3P51956 AC011998.1-201ENST00000433403 117 ntBASIC4.54□□□□□ -1.68
NEK3P51956 BMI1P1-201ENST00000445879 941 ntBASIC4.54□□□□□ -1.68
NEK3P51956 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 AC104308.1-201ENST00000454621 333 ntBASIC4.54□□□□□ -1.68
NEK3P51956 RPL23AP24-201ENST00000458203 385 ntBASIC4.54□□□□□ -1.68
NEK3P51956 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.54□□□□□ -1.68
NEK3P51956 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.54□□□□□ -1.68
NEK3P51956 AC068831.4-201ENST00000556118 109 ntBASIC4.54□□□□□ -1.68
NEK3P51956 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 AC091489.2-201ENST00000566263 604 ntBASIC4.54□□□□□ -1.68
NEK3P51956 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.54□□□□□ -1.68
NEK3P51956 MIR4307-201ENST00000582802 84 ntBASIC4.54□□□□□ -1.68
NEK3P51956 MIR4697-201ENST00000582977 78 ntBASIC4.54□□□□□ -1.68
NEK3P51956 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 AC008507.1-201ENST00000587506 734 ntBASIC4.54□□□□□ -1.68
NEK3P51956 AC092354.2-201ENST00000607786 514 ntBASIC4.54□□□□□ -1.68
NEK3P51956 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.54□□□□□ -1.68
NEK3P51956 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NEK3P51956 AC006065.6-201ENST00000625201 545 ntBASIC4.54□□□□□ -1.68
NEK3P51956 AC092192.1-201ENST00000633154 1018 ntBASIC4.54□□□□□ -1.68
NEK3P51956 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
NEK3P51956 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.54□□□□□ -1.68
NEK3P51956 CPHL1P-201ENST00000461341 3407 ntBASIC4.53□□□□□ -1.68
NEK3P51956 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEK3P51956 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEK3P51956 FRG1BP-201ENST00000278882 761 ntBASIC4.53□□□□□ -1.68
NEK3P51956 RNU6-853P-201ENST00000364306 107 ntBASIC4.53□□□□□ -1.68
NEK3P51956 RNA5SP509-201ENST00000364577 119 ntBASIC4.53□□□□□ -1.68
NEK3P51956 MIR93-201ENST00000385024 80 ntBASIC4.53□□□□□ -1.68
NEK3P51956 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.53□□□□□ -1.68
NEK3P51956 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.53□□□□□ -1.68
NEK3P51956 AC098826.1-201ENST00000433943 471 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.53□□□□□ -1.68
NEK3P51956 AC091862.1-201ENST00000438016 1100 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.53□□□□□ -1.68
NEK3P51956 AC112653.1-201ENST00000443851 386 ntBASIC4.53□□□□□ -1.68
NEK3P51956 RPL36AP33-201ENST00000450395 310 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.53□□□□□ -1.68
NEK3P51956 ZNF114P1-201ENST00000453500 292 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AP1S2P1-201ENST00000457344 379 ntBASIC4.53□□□□□ -1.68
NEK3P51956 RN7SL385P-201ENST00000468873 276 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AC011276.1-201ENST00000469688 323 ntBASIC4.53□□□□□ -1.68
NEK3P51956 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.53□□□□□ -1.68
NEK3P51956 AC026979.1-201ENST00000492525 396 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AL139099.1-201ENST00000497398 403 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AC017037.2-201ENST00000513850 890 ntBASIC4.53□□□□□ -1.68
NEK3P51956 RNU6-528P-201ENST00000516926 100 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AP003497.1-201ENST00000528472 562 ntBASIC4.53□□□□□ -1.68
NEK3P51956 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NEK3P51956 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.53□□□□□ -1.68
NEK3P51956 AL121766.1-201ENST00000547436 487 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.53□□□□□ -1.68
NEK3P51956 AC087481.2-201ENST00000565492 330 ntBASIC4.53□□□□□ -1.68
NEK3P51956 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.53□□□□□ -1.68
NEK3P51956 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.53□□□□□ -1.68
NEK3P51956 AC103710.4-201ENST00000609301 899 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AC083809.1-201ENST00000615051 472 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AL138721.1-201ENST00000616756 179 ntBASIC4.53□□□□□ -1.68
NEK3P51956 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AL360181.4-201ENST00000621752 134 ntBASIC4.53□□□□□ -1.68
NEK3P51956 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
NEK3P51956 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.53□□□□□ -1.68
NEK3P51956 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.53□□□□□ -1.68
NEK3P51956 CR381670.1-201ENST00000624291 1693 ntBASIC4.53□□□□□ -1.68
NEK3P51956 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NEK3P51956 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
NEK3P51956 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.53□□□□□ -1.68
NEK3P51956 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEK3P51956 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
NEK3P51956 LINC00622-201ENST00000562811 1570 ntBASIC4.53□□□□□ -1.69
NEK3P51956 MAPK10-253ENST00000641010 4072 ntBASIC4.52□□□□□ -1.69
NEK3P51956 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEK3P51956 AC012020.1-201ENST00000624541 1728 ntBASIC4.52□□□□□ -1.69
NEK3P51956 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.52□□□□□ -1.69
NEK3P51956 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms