Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC004987.3-201ENST00000413879 771 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.13□□□□□ -1.75
CLCN3P51790 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCN3P51790 AC068533.1-201ENST00000418542 415 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 USP9YP26-201ENST00000421008 661 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.13□□□□□ -1.75
CLCN3P51790 BX119904.4-201ENST00000424402 301 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCN3P51790 HMGN2P31-201ENST00000432430 273 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 YWHAZP7-201ENST00000436906 631 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCN3P51790 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCN3P51790 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.13□□□□□ -1.75
CLCN3P51790 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 RPL12P26-201ENST00000452430 487 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 RPL37P6-202ENST00000464216 403 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 RPL7L1P8-201ENST00000469911 741 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCN3P51790 SETP14-201ENST00000497538 873 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLCN3P51790 HMGB3P13-201ENST00000511263 607 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCN3P51790 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCN3P51790 IGKV2D-19-201ENST00000523346 262 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCN3P51790 AP003461.1-201ENST00000528866 78 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCN3P51790 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCN3P51790 MIR4458-201ENST00000578872 75 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 MIR3922-201ENST00000585192 84 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AL137849.1-201ENST00000604767 169 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AC121247.2-201ENST00000604776 136 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AL158042.1-201ENST00000605338 460 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AC078899.5-201ENST00000612475 178 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AL603755.1-201ENST00000619504 163 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AP006248.2-201ENST00000623309 592 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCN3P51790 AC007490.1-201ENST00000624321 703 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.13□□□□□ -1.75
CLCN3P51790 BMS1P21-201ENST00000634565 365 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCN3P51790 IPO8P1-201ENST00000455509 3109 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 MTND4P34-201ENST00000572715 1371 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 AC021755.1-201ENST00000559747 1447 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCN3P51790 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCN3P51790 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCN3P51790 AC130650.2-201ENST00000618736 2403 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN3P51790 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCN3P51790 MIR208A-201ENST00000362287 71 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 RNA5SP119-201ENST00000362715 117 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 SNORA51.6-201ENST00000384151 125 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 SNORA70E-201ENST00000384492 135 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN3P51790 RPS29P4-201ENST00000414733 161 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN3P51790 AC087650.1-201ENST00000431445 468 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN3P51790 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.12□□□□□ -1.75
CLCN3P51790 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCN3P51790 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCN3P51790 MTND2P19-201ENST00000449129 1012 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCN3P51790 AC073387.1-201ENST00000453261 709 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 RPL18AP17-201ENST00000455326 198 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.12□□□□□ -1.75
CLCN3P51790 RPL21P103-201ENST00000479921 488 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.12□□□□□ -1.75
CLCN3P51790 MTND1P22-201ENST00000510572 951 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN3P51790 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN3P51790 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.12□□□□□ -1.75
CLCN3P51790 AC008015.1-201ENST00000555505 465 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC090888.1-201ENST00000561335 1141 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN3P51790 AC004987.4-201ENST00000603383 338 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC069200.1-201ENST00000609511 323 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC008083.4-201ENST00000615076 444 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN3P51790 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN3P51790 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN3P51790 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN3P51790 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN3P51790 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCN3P51790 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN3P51790 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN3P51790 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN3P51790 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.12□□□□□ -1.75
CLCN3P51790 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLCN3P51790 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCN3P51790 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCN3P51790 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCN3P51790 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLCN3P51790 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CLCN3P51790 OR10J6P-201ENST00000289731 930 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLCN3P51790 SNRPEP3-201ENST00000338402 276 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 RNU6-931P-201ENST00000363850 107 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 Y_RNA.318-201ENST00000365131 97 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms