Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SPATA2P1-201ENST00000431223 2055 ntBASIC2.56□□□□□ -2
HTTP42858 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
HTTP42858 EIF5P1-201ENST00000400019 1231 ntBASIC2.56□□□□□ -2
HTTP42858 AL162578.1-201ENST00000406202 378 ntBASIC2.56□□□□□ -2
HTTP42858 AC004866.2-201ENST00000438285 481 ntBASIC2.56□□□□□ -2
HTTP42858 AC123904.3-201ENST00000547218 814 ntBASIC2.56□□□□□ -2
HTTP42858 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.56□□□□□ -2
HTTP42858 AC122134.1-201ENST00000565664 1104 ntBASIC2.56□□□□□ -2
HTTP42858 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HTTP42858 MIR378A-201ENST00000362177 66 ntBASIC2.56□□□□□ -2
HTTP42858 AL512633.1-201ENST00000399931 655 ntBASIC2.56□□□□□ -2
HTTP42858 AL355379.1-201ENST00000405542 640 ntBASIC2.56□□□□□ -2
HTTP42858 AL158825.1-201ENST00000414735 521 ntBASIC2.56□□□□□ -2
HTTP42858 RPL12P18-201ENST00000437175 325 ntBASIC2.56□□□□□ -2
HTTP42858 RPL23AP74-201ENST00000437246 471 ntBASIC2.56□□□□□ -2
HTTP42858 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.56□□□□□ -2
HTTP42858 AC092436.3-201ENST00000511788 257 ntBASIC2.56□□□□□ -2
HTTP42858 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.56□□□□□ -2
HTTP42858 FTH1P11-201ENST00000517577 551 ntBASIC2.56□□□□□ -2
HTTP42858 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.56□□□□□ -2
HTTP42858 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.56□□□□□ -2
HTTP42858 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HTTP42858 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HTTP42858 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
HTTP42858 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.55□□□□□ -2
HTTP42858 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HTTP42858 COX6CP2-201ENST00000444980 225 ntBASIC2.55□□□□□ -2
HTTP42858 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.55□□□□□ -2
HTTP42858 AC103710.1-201ENST00000610003 901 ntBASIC2.55□□□□□ -2
HTTP42858 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.55□□□□□ -2
HTTP42858 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HTTP42858 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HTTP42858 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.55□□□□□ -2
HTTP42858 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.55□□□□□ -2
HTTP42858 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HTTP42858 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HTTP42858 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
HTTP42858 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.55□□□□□ -2
HTTP42858 MIR613-201ENST00000385248 95 ntBASIC2.55□□□□□ -2
HTTP42858 MTCO2P17-201ENST00000424336 677 ntBASIC2.55□□□□□ -2
HTTP42858 AL365396.1-201ENST00000430854 671 ntBASIC2.55□□□□□ -2
HTTP42858 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.55□□□□□ -2
HTTP42858 AC126182.1-201ENST00000478134 357 ntBASIC2.55□□□□□ -2
HTTP42858 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.55□□□□□ -2
HTTP42858 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC2.55□□□□□ -2
HTTP42858 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HTTP42858 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
HTTP42858 MIR137-201ENST00000385223 102 ntBASIC2.54□□□□□ -2
HTTP42858 ATG3P1-201ENST00000419507 911 ntBASIC2.54□□□□□ -2
HTTP42858 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.54□□□□□ -2
HTTP42858 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.54□□□□□ -2
HTTP42858 LINC00888-204ENST00000487386 421 ntBASIC2.54□□□□□ -2
HTTP42858 HMGB1P19-201ENST00000517578 577 ntBASIC2.54□□□□□ -2
HTTP42858 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.54□□□□□ -2
HTTP42858 AP000790.1-201ENST00000528891 737 ntBASIC2.54□□□□□ -2
HTTP42858 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.54□□□□□ -2
HTTP42858 AC010378.1-201ENST00000619270 362 ntBASIC2.54□□□□□ -2
HTTP42858 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HTTP42858 MIR181B1-201ENST00000385240 110 ntBASIC2.54□□□□□ -2
HTTP42858 RN7SKP285-201ENST00000410137 318 ntBASIC2.54□□□□□ -2
HTTP42858 RPL31P12-201ENST00000422587 358 ntBASIC2.54□□□□□ -2
HTTP42858 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.54□□□□□ -2
HTTP42858 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.54□□□□□ -2
HTTP42858 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.54□□□□□ -2
HTTP42858 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC2.54□□□□□ -2
HTTP42858 Y_RNA.374-201ENST00000365606 101 ntBASIC2.53□□□□□ -2
HTTP42858 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HTTP42858 AC011753.1-201ENST00000451001 220 ntBASIC2.53□□□□□ -2
HTTP42858 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.53□□□□□ -2
HTTP42858 AC108078.2-201ENST00000510750 236 ntBASIC2.53□□□□□ -2
HTTP42858 MTCYBP20-201ENST00000524239 1129 ntBASIC2.53□□□□□ -2
HTTP42858 AP003385.6-201ENST00000531603 374 ntBASIC2.53□□□□□ -2
HTTP42858 NDUFA5P6-201ENST00000542110 379 ntBASIC2.53□□□□□ -2
HTTP42858 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.53□□□□□ -2
HTTP42858 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
HTTP42858 AC002064.3-201ENST00000623448 346 ntBASIC2.53□□□□□ -2
HTTP42858 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HTTP42858 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HTTP42858 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HTTP42858 AL139276.1-201ENST00000311910 1001 ntBASIC2.53□□□□□ -2
HTTP42858 FAT1P1-201ENST00000406588 507 ntBASIC2.53□□□□□ -2
HTTP42858 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.53□□□□□ -2
HTTP42858 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.53□□□□□ -2
HTTP42858 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
HTTP42858 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.53□□□□□ -2
HTTP42858 MFSD8-245ENST00000641743 948 ntBASIC2.53□□□□□ -2
HTTP42858 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HTTP42858 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.53□□□□□ -2
HTTP42858 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.53□□□□□ -2.01
HTTP42858 SETP4-201ENST00000455717 868 ntBASIC2.53□□□□□ -2.01
HTTP42858 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.53□□□□□ -2.01
HTTP42858 RN7SL283P-201ENST00000489055 303 ntBASIC2.53□□□□□ -2.01
HTTP42858 AC106872.2-201ENST00000494303 480 ntBASIC2.53□□□□□ -2.01
HTTP42858 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC2.52□□□□□ -2.01
HTTP42858 RNA5SP383-201ENST00000362934 120 ntBASIC2.52□□□□□ -2.01
HTTP42858 RPS20P25-201ENST00000412447 352 ntBASIC2.52□□□□□ -2.01
HTTP42858 PPIAP17-201ENST00000438507 471 ntBASIC2.52□□□□□ -2.01
HTTP42858 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.52□□□□□ -2.01
HTTP42858 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
HTTP42858 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms