Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
TNFSF9P41273 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TNFSF9P41273 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.21□□□□□ -1.89
TNFSF9P41273 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 PABPC1P7-201ENST00000413177 1513 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TNFSF9P41273 SNORA80A-201ENST00000363922 136 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 AL138880.1-201ENST00000405824 642 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFSF9P41273 EEF1A1P41-201ENST00000414667 207 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AC245054.2-201ENST00000415639 319 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AC022018.1-201ENST00000430685 241 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AC236972.1-201ENST00000433225 199 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFSF9P41273 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFSF9P41273 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC125238.1-201ENST00000448842 249 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AC087879.1-201ENST00000474343 374 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 RPL31P13-201ENST00000484151 370 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFSF9P41273 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFSF9P41273 ZNF192P1-203ENST00000565888 810 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC011468.4-201ENST00000603942 409 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AL033523.1-201ENST00000605153 153 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AC100814.1-201ENST00000606963 623 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AP001033.2-201ENST00000609701 1003 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC073569.3-201ENST00000619055 682 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AP003400.6-201ENST00000624698 740 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 AC092608.3-201ENST00000625017 386 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFSF9P41273 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC000403.1-201ENST00000613696 3585 ntBASIC3.21□□□□□ -1.9
TNFSF9P41273 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TNFSF9P41273 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFSF9P41273 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFSF9P41273 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF9P41273 SNORA7.2-201ENST00000364446 145 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF9P41273 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.2□□□□□ -1.9
TNFSF9P41273 HMGB3P23-201ENST00000414981 585 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 MORF4L1P7-201ENST00000426038 703 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFSF9P41273 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.2□□□□□ -1.9
TNFSF9P41273 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF9P41273 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.2□□□□□ -1.9
TNFSF9P41273 UBE2DNL-203ENST00000474922 222 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 AC078785.3-201ENST00000476607 425 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 AC015724.1-201ENST00000478577 156 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 HMGB1P38-201ENST00000490557 577 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFSF9P41273 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TNFSF9P41273 ATP5F1P7-201ENST00000567330 760 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF9P41273 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.2□□□□□ -1.9
TNFSF9P41273 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.2□□□□□ -1.9
TNFSF9P41273 IGHV3-29-201ENST00000604817 344 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 AC093732.2-201ENST00000607950 274 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.2□□□□□ -1.9
TNFSF9P41273 AL356118.1-201ENST00000635272 1078 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF9P41273 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.2□□□□□ -1.9
TNFSF9P41273 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TNFSF9P41273 AL035425.3-201ENST00000564206 4996 ntBASIC3.2□□□□□ -1.9
TNFSF9P41273 AL645568.2-201ENST00000432815 1337 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFSF9P41273 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RNU6-335P-201ENST00000364563 113 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 SNORA51.2-201ENST00000364595 132 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RNU6-7-201ENST00000364784 107 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RNU6-8-201ENST00000365467 107 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 Y_RNA.500-201ENST00000384466 111 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 Y_RNA.510-201ENST00000384511 114 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RNU6-328P-201ENST00000390887 106 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RNU6-796P-201ENST00000391086 107 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 MTND3P20-201ENST00000407663 186 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 U3.42-201ENST00000408746 214 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFSF9P41273 TOMM22P1-201ENST00000418578 312 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFSF9P41273 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFSF9P41273 AL662791.1-201ENST00000441992 928 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RPS26P30-201ENST00000443431 335 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms