Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 FAM106CP-201ENST00000582212 507 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SCN4AP35499 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCN4AP35499 MTCO1P9-201ENST00000505577 1534 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCN4AP35499 AC092881.1-201ENST00000638218 2733 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 MTCYBP29-201ENST00000436327 1006 ntBASIC3.21□□□□□ -1.89
SCN4AP35499 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.21□□□□□ -1.89
SCN4AP35499 VN1R48P-201ENST00000448149 1036 ntBASIC3.21□□□□□ -1.89
SCN4AP35499 C1DP3-201ENST00000455013 423 ntBASIC3.21□□□□□ -1.89
SCN4AP35499 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.21□□□□□ -1.89
SCN4AP35499 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.21□□□□□ -1.89
SCN4AP35499 AC078817.1-201ENST00000492623 435 ntBASIC3.21□□□□□ -1.89
SCN4AP35499 AC025260.1-201ENST00000548858 430 ntBASIC3.21□□□□□ -1.89
SCN4AP35499 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.21□□□□□ -1.89
SCN4AP35499 AC079228.1-201ENST00000624774 1049 ntBASIC3.21□□□□□ -1.89
SCN4AP35499 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN4AP35499 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCN4AP35499 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN4AP35499 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCN4AP35499 RNU1-35P-201ENST00000362782 153 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 AL137014.1-201ENST00000420490 1226 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN4AP35499 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 FCF1P1-201ENST00000432690 571 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN4AP35499 CACYBPP1-201ENST00000438592 684 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 FAM103A2P-201ENST00000444122 354 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCN4AP35499 AL353705.4-201ENST00000449661 238 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 FAM172BP-201ENST00000487497 1089 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 HAUS1P1-201ENST00000505275 832 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN4AP35499 RNU6-760P-201ENST00000516078 97 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 RN7SKP43-201ENST00000516173 320 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 AP000867.2-201ENST00000532468 320 ntBASIC3.21□□□□□ -1.9
SCN4AP35499 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN4AP35499 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN4AP35499 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN4AP35499 AC004925.1-201ENST00000624256 2706 ntBASIC3.2□□□□□ -1.9
SCN4AP35499 MIR26A1-201ENST00000362205 77 ntBASIC3.2□□□□□ -1.9
SCN4AP35499 RNU4-7P-201ENST00000364758 141 ntBASIC3.2□□□□□ -1.9
SCN4AP35499 ISCA1P6-201ENST00000427740 390 ntBASIC3.2□□□□□ -1.9
SCN4AP35499 AC092013.1-201ENST00000438795 332 ntBASIC3.2□□□□□ -1.9
SCN4AP35499 AL513043.1-201ENST00000439124 535 ntBASIC3.2□□□□□ -1.9
SCN4AP35499 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN4AP35499 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN4AP35499 YWHAZP1-201ENST00000556286 722 ntBASIC3.2□□□□□ -1.9
SCN4AP35499 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN4AP35499 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN4AP35499 AC103710.3-201ENST00000608157 948 ntBASIC3.2□□□□□ -1.9
SCN4AP35499 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SCN4AP35499 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN4AP35499 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN4AP35499 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN4AP35499 SNORD62.1-201ENST00000362541 86 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RNU6-1251P-201ENST00000364502 107 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN4AP35499 RNU6-1320P-201ENST00000390838 107 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RNU6-1269P-201ENST00000391139 107 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RNU4-53P-201ENST00000410828 140 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 NDUFB4P5-201ENST00000415445 361 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 AC007390.1-201ENST00000415722 356 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 AC244453.4-201ENST00000419150 388 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RPL7P53-201ENST00000421245 739 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RPL23AP4-201ENST00000427757 463 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 OR2B8P-201ENST00000432841 938 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 AL392003.1-201ENST00000434394 243 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN4AP35499 OR6K1P-201ENST00000456766 971 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RNU6-599P-201ENST00000459383 107 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RNU6-1193P-201ENST00000459461 107 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 AC003982.1-202ENST00000469928 248 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
SCN4AP35499 ATG10-AS1-201ENST00000504846 648 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN4AP35499 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.19□□□□□ -1.9
SCN4AP35499 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN4AP35499 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN4AP35499 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SCN4AP35499 AC022069.1-201ENST00000582910 658 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCN4AP35499 RNU6-368P-201ENST00000620928 107 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RNU6-538P-201ENST00000622329 107 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN4AP35499 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN4AP35499 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN4AP35499 RNVU1-3-201ENST00000364313 161 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 BTF3P7-201ENST00000407097 488 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN4AP35499 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN4AP35499 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN4AP35499 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN4AP35499 RPL21P99-201ENST00000480369 423 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCN4AP35499 RNA5SP458-201ENST00000516188 119 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN4AP35499 AC055876.1-202ENST00000567053 138 ntBASIC3.19□□□□□ -1.9
SCN4AP35499 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN4AP35499 AC019131.2-201ENST00000609071 870 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms