Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 HSPE1P11-201ENST00000339579 310 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC067945.1-201ENST00000342609 618 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 RNU6-511P-201ENST00000363496 107 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 SNORA62.1-201ENST00000364287 154 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 MIR550A3-201ENST00000390735 95 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXC12P31275 MTCO3P46-201ENST00000425787 232 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 OR2AS1P-201ENST00000427827 319 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 KRT8P51-201ENST00000438938 274 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC007677.1-201ENST00000445757 515 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 MRPL50P4-201ENST00000446432 475 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 CBX1P2-201ENST00000453841 458 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 RNU7-182P-201ENST00000459009 62 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC12P31275 HMGN1P13-201ENST00000505795 138 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC116562.3-201ENST00000506136 177 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC103851.1-201ENST00000506833 274 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 RNU4-29P-201ENST00000515943 174 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 SUMO2P20-201ENST00000520803 283 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 FAM60DP-201ENST00000524174 632 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC068587.5-201ENST00000528506 175 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC12P31275 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC12P31275 BNIP3P6-201ENST00000549284 499 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC12P31275 AC005668.1-201ENST00000571142 476 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC12P31275 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 AC060780.2-201ENST00000589047 198 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 AC007687.1-201ENST00000602704 304 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC093388.1-201ENST00000609166 430 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 Mico1.1-201ENST00000611698 204 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 RMST_7.1-201ENST00000621935 268 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXC12P31275 SCARNA15-201ENST00000607520 4325 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC12P31275 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXC12P31275 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 MTCO1P9-201ENST00000505577 1534 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC12P31275 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 RNU6-989P-201ENST00000362756 107 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 Y_RNA.58-201ENST00000362807 102 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 Y_RNA.154-201ENST00000363624 102 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 RNY3P1-201ENST00000365085 102 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 RNA5SP131-201ENST00000365452 119 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 RNY3-201ENST00000365484 102 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 RNU6-432P-201ENST00000384196 109 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 Y_RNA.490-201ENST00000384413 102 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXC12P31275 AC005042.1-201ENST00000393397 800 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 MIR1250-201ENST00000408098 113 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 CHIAP3-201ENST00000423668 1133 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 FABP7P2-201ENST00000429946 379 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.92□□□□□ -1.62
HOXC12P31275 IFNA20P-201ENST00000436840 528 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC12P31275 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 RPL12P39-201ENST00000455456 496 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 RPL5P30-201ENST00000465511 891 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 RN7SL808P-201ENST00000496066 299 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC12P31275 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC12P31275 AC112206.3-201ENST00000514578 389 ntBASIC4.92□□□□□ -1.62
HOXC12P31275 SNORD116-26-201ENST00000516006 96 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms